Gene YpAngola_A0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0827 
Symbol 
ID5799289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp850803 
End bp851504 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID641338824 
Producthypothetical protein 
Protein accessionYP_001605402 
Protein GI162421546 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGG CTAAATTAAA ATTTCGACTA CACCGAACAG CAATTGTACT GATCTGTTTG 
GCATTATTGG TCTTGCTGAT GCAAGGCGCA TCCTATTTCA GCCTGAGCCA CCAGTTAGCA
CGTTCAGAGC AGGTCGAAGA GCTGGCACAA ACACTCGCCA AACAAGTTGC TTTTAGCTTG
TCGCCCATTA TGGATAGCGG TGACGACAAT ATTGATAGCC AGAAAGTCGA TGCCATTCTT
CAACAACTGA CACAATCCAG CCGTATTTTA GATGCCAGCG TCTATCAGAT TGACGGTACG
TTGGTTGCCA GCGCCGGAGA AAATGTGAAG GTACGCGACC GGTTGGCACT GGATGGTAAA
CGCCCTGGCA GTTATTTCAA CCACCAAATA GTTGAAATGA TCGCGGGTAA CAGTGGGCCA
AGTGGTTTTC TGCGCATGAC ACTGGATACC CACGTGTTGG CGACGGAATC CAAGCAAGTG
GATAACACCA CTAACTTACT GCGTCTGATG ATTCTGGTGG CTCTGGCCGT GGGGATTATT
CTGGCCCGCA CCCTGTTACA AGGCCGCCGT AGCCGTTGGC AGCAATCCCC TTATCTGCTG
ACGGCCAATA TACCGGTTAA AGAAGAAGAT GAAAGCGAAG ATGACACGCC AGAAGCCCTC
GTCGGTCAGG CGGAAACCGA CCATAAGCCT GCCGATAAAT AG
 
Protein sequence
MARAKLKFRL HRTAIVLICL ALLVLLMQGA SYFSLSHQLA RSEQVEELAQ TLAKQVAFSL 
SPIMDSGDDN IDSQKVDAIL QQLTQSSRIL DASVYQIDGT LVASAGENVK VRDRLALDGK
RPGSYFNHQI VEMIAGNSGP SGFLRMTLDT HVLATESKQV DNTTNLLRLM ILVALAVGII
LARTLLQGRR SRWQQSPYLL TANIPVKEED ESEDDTPEAL VGQAETDHKP ADK