Gene YpAngola_A0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0821 
Symbol 
ID5799283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp842921 
End bp843427 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID641338818 
ProductompA family protein 
Protein accessionYP_001605396 
Protein GI162419496 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA TGCAAAACAA GCGTTTAATA CAACGTATTT GGGTCAGTTT CCTGGCAATG 
GGTTTGATGC TATTAGTGGG GTGTCAGGCT AAACCACAAG GGCTAACACC TGATCAAATC
GCCGCATTGC AAGAGCAGGG GTTTAAATTA ACCGATAATG GCTGGGAATT TGGCCTGGCA
AATAAAGTGC TATTCGACAG TGATGTGAAA AAATTAAATT CTGAGGGTAT GCAAACCGTA
CAAAAGATTG GCCGGATATT GTCAGATGTG GGGATTAAGC ATATGCGGGT TGATGGTCAT
ACCGACTCCG TCGGGAAGGA TGACTATAAT CAACAATTAT CCTACCAGCG CGCCTTAGCC
GTAGCCGATA CTCTCGCTAC CGTCGGTATT CCAAAGAGTA ATATTGATGT TCGTGGCCGT
GGCAAGTTAG AGCCCGTCGC GGATAACCGC ACCAGTAAAG GCCGAGCCGA AAACCGCCGC
GTCGCCATTA TTATCACCGC GTCCTAA
 
Protein sequence
MQKMQNKRLI QRIWVSFLAM GLMLLVGCQA KPQGLTPDQI AALQEQGFKL TDNGWEFGLA 
NKVLFDSDVK KLNSEGMQTV QKIGRILSDV GIKHMRVDGH TDSVGKDDYN QQLSYQRALA
VADTLATVGI PKSNIDVRGR GKLEPVADNR TSKGRAENRR VAIIITAS