Gene YpAngola_A0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0787 
SymbolispH 
ID5799249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp802386 
End bp803339 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content49% 
IMG OID641338784 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_001605362 
Protein GI162420358 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.42411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAT TGCTGGCTAA TCCACGTGGC TTTTGTGCTG GCGTTGACCG GGCTATCAGT 
ATTGTTGAAC GTGCGATAGA AATGTATGGC GCGCCAATTT ATGTACGCCA TGAGGTGGTA
CATAACCGCT ATGTGGTTGA GAGCCTGTGC GAGCGCGGTG CTATCTTCAT CGAGGAAATT
TCAGAGGTGC CAGATGGCTC CATTCTGATT TTCTCGGCCC ATGGTGTGTC ACAGGCCGTT
CGGGCAGAGG CCCGTTCACG TAATTTGACG ATGCTGTTTG ATGCAACCTG TCCATTGGTT
ACCAAAGTCC ATATGGAAGT CGCCCGTGCG AGCCGTAAGG GTAAAGAAGC TATTTTGATC
GGCCATGCCG GTCATCCAGA AGTGGAAGGG ACCATGGGGC AATACAGCAA CCCTAACGGG
GGGATGTATT TGGTTGAATC GCCTGATGAC GTTTGGCAGT TGAATGTCAA AGATGAGAAT
AATCTATGTT TTATGACGCA GACCACCTTA TCGGTTGATG ATACCTCTGC TGTTATCGAT
GCGTTGAACA CGCGCTTCCC AAAGATAGTC GGCCCACGCA AAGATGATAT TTGCTATGCC
ACAACCAATC GGCAAGAGGC AGTACGTAAT CTGGCAAATG ATGCCGATAT CGTATTGGTC
GTGGGGTCGA AAAACTCCTC TAACTCTAAC CGATTGGCCG AACTGGTACA GCGAATGGGT
AAGCCCGCTT ATCTGATTGA CTCTGCGGCA GATATTCAGG AATTTTGGTT ACAGGGCGCC
AAGTGTATCG GTGTTACCGC TGGTGCATCT GCCCCTGATA TTTTGGTGCA GCAAGTGATT
GCACGCTTAA AAGATCTTGG TGCTGGTGAA TCGATTGAAC TCAGCGGTCG CGAAGAAAAT
ATTGTTTTTG AAGTACCGAA AGAACTGCGT GTTGAGGTTA AACAGATCGA CTGA
 
Protein sequence
MQILLANPRG FCAGVDRAIS IVERAIEMYG APIYVRHEVV HNRYVVESLC ERGAIFIEEI 
SEVPDGSILI FSAHGVSQAV RAEARSRNLT MLFDATCPLV TKVHMEVARA SRKGKEAILI
GHAGHPEVEG TMGQYSNPNG GMYLVESPDD VWQLNVKDEN NLCFMTQTTL SVDDTSAVID
ALNTRFPKIV GPRKDDICYA TTNRQEAVRN LANDADIVLV VGSKNSSNSN RLAELVQRMG
KPAYLIDSAA DIQEFWLQGA KCIGVTAGAS APDILVQQVI ARLKDLGAGE SIELSGREEN
IVFEVPKELR VEVKQID