| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0785 |
|---|
| Symbol | dapB |
|---|
| ID | 5799247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 800272 |
|---|
| End bp | 801093 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641338782 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_001605360 |
|---|
| Protein GI | 162421157 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.425853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.321154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT CAACAATTCG TATTGCTATT GTCGGCGCGG GTGGACGGAT GGGGCGGCAA
TTAATTCAAG CCGTTACGCA GATGGAAGGC GTTGTCTTAG GGGCGGCTAT CGAGCGTAAA
GGGTCCACGT TGGTAGGCAG TGATGCGGGT GAGCTGGCGG GTGTTGGCTT GTTAAATGTC
ATTGTTGGCG ATGATTTATC CCAACTTACT GATAATTTTG ACGTACTGAT CGACTTTACC
CGCCCAGAAG GTACGTTGGA ACATTTAGCT ATTTGCCGTC AGCATCGGAA AGCGATGGTG
ATTGGTACCA CGGGTTTTGA TGAGGCAGGT AAAGCGGCCA TTAGTGAGGC TGCGGCAGAC
ATTGGTATTG TGTTCGCAGC GAACTTCAGT GTTGGGGTGA ATGTGGTACT GAAATTGCTG
GAAAAGGCGG CGAAAGTCAT GGGCGATTAT ACCGATATTG AAATTATCGA AGCCCATCAC
CGCCACAAAG TGGATGCACC ATCAGGAACG GCGCTGGCAA TGGGTGAGGC GATTGCTGAT
GCTATGGGGC GCTCCTTGAA AGATTGTGCA GTTTATAGCC GTGAAGGCTA TACCGGTGAG
CGTAAACCGG GGACCATCGG TTTCGCGACC GTGCGTGCTG GCGATATTGT GGGTGAACAC
ACGGCAATGT TTGCTGATAT CGGCGAACGG GTTGAGATCA CTCACAAAGC GACGAGCCGG
ATGACTTTTG CCCATGGTGC GGTTAAGTCT GCCATTTGGC TTGGTAAGCA TGATAATGGC
TTGTTTGATA TGCGTGATGT ACTGAATCTT AACGAACTTT AA
|
|---|
| Protein sequence | MTDSTIRIAI VGAGGRMGRQ LIQAVTQMEG VVLGAAIERK GSTLVGSDAG ELAGVGLLNV
IVGDDLSQLT DNFDVLIDFT RPEGTLEHLA ICRQHRKAMV IGTTGFDEAG KAAISEAAAD
IGIVFAANFS VGVNVVLKLL EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAD
AMGRSLKDCA VYSREGYTGE RKPGTIGFAT VRAGDIVGEH TAMFADIGER VEITHKATSR
MTFAHGAVKS AIWLGKHDNG LFDMRDVLNL NEL
|
|---|
| |