Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0772 |
Symbol | ksgA |
ID | 5799234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 788835 |
End bp | 789653 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641338769 |
Product | dimethyladenosine transferase |
Protein accession | YP_001605347 |
Protein GI | 162421183 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0349133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.113375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATA GAGTCCACCA AGGGCATTTT GCCCGCAAAC GCTTTGGACA AAACTTTTTA AACGATCAGT TTGTCATCGA CAGTATTGTC TCCGCAATCC ACCCAGTTCC TGGCGAAGCG GTCGTTGAAA TTGGCCCCGG TTTAGGTGCC TTAACCGAAC CCGTCGCGGC TCGTATGGAT CACATGACCG TTATTGAGCT GGATCGCGAT CTGGCTGCAC GGCTGGCTAG CCATCCTCAA CTGAAAGATA AGCTAACCAT TCATCAGCAA GATGCGATGA AAGTAAACTT TTCCGAACTG TCAGAGCAAG CGGGGCAACC ATTACGGGTA TTTGGTAACC TGCCATACAA TATTTCTACG CCGCTGATGT TCCATCTTTT CAGCTATACT GATGCTATCC GCGACATGCA TTTCATGTTG CAAAAAGAGG TTGTTAACCG CTTGGTTGCT GGCCCCAACA GTAAAACTTA TGGCCGTCTG ACCGTCATGG CGCAATACTA TTGCAATGTG ATCCCGGTTT TGGAAGTACC GCCGACTGCG TTTACCCCAG CCCCAAAAGT TGATTCCGCA GTTGTGCGCC TCATTCCACA TGTGCAAATG CCTCACCCGG TCGGTGACGT TCGTATGCTG AGCCGTATTA CTACGCAAGC CTTTAACCAA CGTAGAAAAA CGGTGCGCAA TAGCTTAGGT GATTTATTCA CTTCAGAGCA ATTAATCGAA TTAGGTATTG ACCCGATACT CAGGGCAGAA AATATTTCGG TAGCGCAATA CTGTAAGCTA GCTAACTGGC TTTCAGCTCA ATCGACACCG CAGAAATAA
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Protein sequence | MNNRVHQGHF ARKRFGQNFL NDQFVIDSIV SAIHPVPGEA VVEIGPGLGA LTEPVAARMD HMTVIELDRD LAARLASHPQ LKDKLTIHQQ DAMKVNFSEL SEQAGQPLRV FGNLPYNIST PLMFHLFSYT DAIRDMHFML QKEVVNRLVA GPNSKTYGRL TVMAQYYCNV IPVLEVPPTA FTPAPKVDSA VVRLIPHVQM PHPVGDVRML SRITTQAFNQ RRKTVRNSLG DLFTSEQLIE LGIDPILRAE NISVAQYCKL ANWLSAQSTP QK
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