Gene YpAngola_A0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0758 
Symbol 
ID5799220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp772770 
End bp773753 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID641338755 
Producthypothetical protein 
Protein accessionYP_001605333 
Protein GI162419255 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.300158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0515134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCC TCCAGACGCT GAAAAACACG TTTCTGCCGG GTATCTCGGC CAGTCAGGAC 
TTTTTCGAGT TGCTGCGTCG CATTGAGCGT GCCACTCCAG AGCAAGGCCG GCTTGGCACC
CAACGTGATC GTAGCCATCT GCGGCTACGT ATTATTCAGC CTGCCGATAT GGGATTTGCA
CCGCGTGAAG TGAGTGATAT CAGGCAAACG CTGAACACTC ATCAGCATCT GGCAGAGATC
ACCATTTTCT GCCGCCATTT TGGTTTATTT GCCCCGTATG GCCCGTTGCC AATACATGTT
ACCGAACATG CTCGTAACGA AGCGTTGGCT AAACGTAATC AGGCCTTTGA ACATTTTGCG
GGCATTCTCA GCCAGCGAAT GGCGATCTTG CATTATCGCT CTTGGGCCCA AATGCACGTC
GCCGTGGGGC ATGATCGCGC GTCAGCCAAT CCCTTTATGA ACCATGTGCG TCAAATCGCG
GGCCTAACGC CGCAGCAAGC GCTGAATTCA CATGTGGATC GGGTACGGCG TTGCTTTCCG
GGGGTGTATC TGCCGGGCAG AGGATCATTA CGCAAATTAC AGGAGATCCT GAGCCTGTAT
TTCTCGGTTC CTATCCGTGT TGAAGCCCGT AAAGGATTGT GGATTGACGA CTCGCGCAAT
ATAGAAAGCC AACGTATGGG ACGGTTGGGT AACACGCGTA TTGGCAGCCG TTTCTTCGAT
GTGCAGCACA GCCTGGTGTT ATCTATTGGT CCGGTATCTG ACCCCCAATA TCTGGATTTT
CAACGCAACA GCAAACGCAT TAACACTCTG GTGCAAATCT GCCATGACTT TGTCCGCCAT
CGGATGGTGC TGGACGTGCA ATTAATCATA CAGACCTCAC CCAATATGGC TTGTCGTCTT
GGCGGTGGAA CGCTCAGTCG CCATAGCTGG TTAAAGCCAG GCTCAGCCTT GAGTATACAG
CCAATTTATA GAACGGTTAC CTAG
 
Protein sequence
MASLQTLKNT FLPGISASQD FFELLRRIER ATPEQGRLGT QRDRSHLRLR IIQPADMGFA 
PREVSDIRQT LNTHQHLAEI TIFCRHFGLF APYGPLPIHV TEHARNEALA KRNQAFEHFA
GILSQRMAIL HYRSWAQMHV AVGHDRASAN PFMNHVRQIA GLTPQQALNS HVDRVRRCFP
GVYLPGRGSL RKLQEILSLY FSVPIRVEAR KGLWIDDSRN IESQRMGRLG NTRIGSRFFD
VQHSLVLSIG PVSDPQYLDF QRNSKRINTL VQICHDFVRH RMVLDVQLII QTSPNMACRL
GGGTLSRHSW LKPGSALSIQ PIYRTVT