Gene YpAngola_A0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0744 
SymbolrhaA 
ID5799206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp755902 
End bp757158 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content53% 
IMG OID641338742 
ProductL-rhamnose isomerase 
Protein accessionYP_001605320 
Protein GI162418109 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4806] L-rhamnose isomerase 
TIGRFAM ID[TIGR01748] L-rhamnose isomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.128512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CTATTGAACA GGCCTGGGAT CTGGCTAAAC AGCGTTTTGC CGCTGTCGGC 
GTTGATGTTG ATGCCGCACT CACCCGTCTT GATACGCTAC CGGTCTCCAT GCACTGCTGG
CAAGGCGATG ATGTCACCGG TTTTGAGGAT CCCGATGGCG TATTGACCGG CGGAATTCAG
GCAACAGGAA ACTATCCCGG CAAAGCGCGC AATGCGACCG AGTTGCGTTC TGACCTTGAA
TTGGCTTTGG CATTAATTCC TGGCCCTAAG CGCCTCAATT TACATGCTAT TTATCTGGAA
TCTGACACGC CGGTTGCGCG CAATAAAATT GAGCCGCGCC ACTTTAGCCA CTGGGTTGCA
TGGGCCAAAA AACACCAGTT GGGGCTGGAT TTTAACCCCT CTTGCTTCTC TCACCCACTC
AGCGCTGACG GCTTTACCTT GTCTCATGCT GATCCGGAAA TCCGCCAGTT CTGGATTGAA
CACTGTCAGG CGAGTCGCCG GGTTTCTGCC TATTTTGGTG AACAGTTAGG AACGCCGTCG
GTCATGAATA TCTGGATCCC CGATGGCATG AAAGACACAC CGATTGATCG CCTTGCCCCC
CGTCAGCGCC TGCTATCGGC TCTGGATGAA GTCATCAGCG AGAAGTTAAA CCCGGCTCAC
CATATTGATG CGGTTGAGAG CAAATTGTTT GGTATTGGTG CTGAAAGTTA CACCGTAGGC
TCTAACGAGT TTTATATGGG TTATGCCGCC AGCCGCCAAA CGGCGCTGTG TCTGGATGCG
GGTCACTTCC ATCCAACCGA GGTGATTTCC GACAAAATAT CCAGCGCCAT GCTGTATGTC
CCACGCCTGC TATTGCATGT CAGCCGTCCG GTTCGCTGGG ACAGTGACCA TGTGGTGTTA
CTGGATGATG AAACCCAAGC CATCGCCAGC GAAATTATTC GTCACAACCT GTTTGATCGG
GTTCACATCG GCCTCGACTT CTTTGATGCC TCCATTAACC GGATTGCCGC TTGGGTTATT
GGCACCCGCA ACATGAAAAA GGCCCTGTTA CGCGCCTTAC TGGAGCCGAC CGACAGGCTA
CGTCAACTGG AATTACGCGG TGATTACACT GCACGGCTGG CGCTGCTGGA AGAACAAAAA
TCCCTGCCAT GGCAAGCCAT CTGGGAAGGT TACTGCCAGC GCAATGACGT ACCGGTTGAT
GCCCGCTGGC TTGACGCAGT ACGTGAATAT GAACAACAGA TTCTCAGCCA ACGTTAA
 
Protein sequence
MTNSIEQAWD LAKQRFAAVG VDVDAALTRL DTLPVSMHCW QGDDVTGFED PDGVLTGGIQ 
ATGNYPGKAR NATELRSDLE LALALIPGPK RLNLHAIYLE SDTPVARNKI EPRHFSHWVA
WAKKHQLGLD FNPSCFSHPL SADGFTLSHA DPEIRQFWIE HCQASRRVSA YFGEQLGTPS
VMNIWIPDGM KDTPIDRLAP RQRLLSALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAA SRQTALCLDA GHFHPTEVIS DKISSAMLYV PRLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIIRHNLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTDRL
RQLELRGDYT ARLALLEEQK SLPWQAIWEG YCQRNDVPVD ARWLDAVREY EQQILSQR