Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0744 |
Symbol | rhaA |
ID | 5799206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 755902 |
End bp | 757158 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641338742 |
Product | L-rhamnose isomerase |
Protein accession | YP_001605320 |
Protein GI | 162418109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4806] L-rhamnose isomerase |
TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.128512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACT CTATTGAACA GGCCTGGGAT CTGGCTAAAC AGCGTTTTGC CGCTGTCGGC GTTGATGTTG ATGCCGCACT CACCCGTCTT GATACGCTAC CGGTCTCCAT GCACTGCTGG CAAGGCGATG ATGTCACCGG TTTTGAGGAT CCCGATGGCG TATTGACCGG CGGAATTCAG GCAACAGGAA ACTATCCCGG CAAAGCGCGC AATGCGACCG AGTTGCGTTC TGACCTTGAA TTGGCTTTGG CATTAATTCC TGGCCCTAAG CGCCTCAATT TACATGCTAT TTATCTGGAA TCTGACACGC CGGTTGCGCG CAATAAAATT GAGCCGCGCC ACTTTAGCCA CTGGGTTGCA TGGGCCAAAA AACACCAGTT GGGGCTGGAT TTTAACCCCT CTTGCTTCTC TCACCCACTC AGCGCTGACG GCTTTACCTT GTCTCATGCT GATCCGGAAA TCCGCCAGTT CTGGATTGAA CACTGTCAGG CGAGTCGCCG GGTTTCTGCC TATTTTGGTG AACAGTTAGG AACGCCGTCG GTCATGAATA TCTGGATCCC CGATGGCATG AAAGACACAC CGATTGATCG CCTTGCCCCC CGTCAGCGCC TGCTATCGGC TCTGGATGAA GTCATCAGCG AGAAGTTAAA CCCGGCTCAC CATATTGATG CGGTTGAGAG CAAATTGTTT GGTATTGGTG CTGAAAGTTA CACCGTAGGC TCTAACGAGT TTTATATGGG TTATGCCGCC AGCCGCCAAA CGGCGCTGTG TCTGGATGCG GGTCACTTCC ATCCAACCGA GGTGATTTCC GACAAAATAT CCAGCGCCAT GCTGTATGTC CCACGCCTGC TATTGCATGT CAGCCGTCCG GTTCGCTGGG ACAGTGACCA TGTGGTGTTA CTGGATGATG AAACCCAAGC CATCGCCAGC GAAATTATTC GTCACAACCT GTTTGATCGG GTTCACATCG GCCTCGACTT CTTTGATGCC TCCATTAACC GGATTGCCGC TTGGGTTATT GGCACCCGCA ACATGAAAAA GGCCCTGTTA CGCGCCTTAC TGGAGCCGAC CGACAGGCTA CGTCAACTGG AATTACGCGG TGATTACACT GCACGGCTGG CGCTGCTGGA AGAACAAAAA TCCCTGCCAT GGCAAGCCAT CTGGGAAGGT TACTGCCAGC GCAATGACGT ACCGGTTGAT GCCCGCTGGC TTGACGCAGT ACGTGAATAT GAACAACAGA TTCTCAGCCA ACGTTAA
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Protein sequence | MTNSIEQAWD LAKQRFAAVG VDVDAALTRL DTLPVSMHCW QGDDVTGFED PDGVLTGGIQ ATGNYPGKAR NATELRSDLE LALALIPGPK RLNLHAIYLE SDTPVARNKI EPRHFSHWVA WAKKHQLGLD FNPSCFSHPL SADGFTLSHA DPEIRQFWIE HCQASRRVSA YFGEQLGTPS VMNIWIPDGM KDTPIDRLAP RQRLLSALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG SNEFYMGYAA SRQTALCLDA GHFHPTEVIS DKISSAMLYV PRLLLHVSRP VRWDSDHVVL LDDETQAIAS EIIRHNLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTDRL RQLELRGDYT ARLALLEEQK SLPWQAIWEG YCQRNDVPVD ARWLDAVREY EQQILSQR
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