Gene YpAngola_A0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0650 
SymbolhmuR 
ID5799112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp653398 
End bp655428 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content51% 
IMG OID641338651 
Producthemin receptor precursor 
Protein accessionYP_001605232 
Protein GI162420570 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.332086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTT CCACTTCCGA CCGTTTCCGC TGGTCCTCAC TCAGTTTGGC AATCGCTTGT 
ACCTTGCCCC TTGCTACTCA AGCTGCTGAT ACCACAACCA CTCAAACCAG CAGTAAAAAG
CACAGCACCG ACACCATGGT CGTCACAGCA ACCGGTAATG AGCGTAGCAG TTTTGAAGCG
CCAATGATGG TAACGGTCAT CGAAGGGAAT GCCCCTACCA GCCAAACCGC CGCGACGGCC
GCAGATATGC TGCGACAAGT ACCAGGGCTG ACCGTCACTG GCAGCGGGCG TACCAACGGT
CAAGATGTGG TGATGCGAGG TTACGGTAAA CAAGGCGTGT TGACACTGGT TGATGGTGTT
CGTCAGGGGA CCGATACCGG TCACTTGAAC TCCACTTTCC TCGATCCTGC GTTAGTCAAA
CGTATCGAAA TCGTCCGTGG GCCAGCAGCA CTGCTGTACG GCAGTGGCGC TCTCGGCGGG
GTTATTGCCT ATGAAACCGT GGATGCAGCG GACATGCTGC AACCGGGCCA AAACAGTGGT
TATCGGGTTT ACAGCTCTGC CGCAACGGGT GATCACAGCT TCGGTCTGGG AGCCAGCGCC
TTTGGCCGCA CCGATGATCT GGATGGTATC CTCTCTTTCG GTACCCGTGA TATCGGCAAC
ATTCGTCAAA GCAACGGTTT TAATGCCCCG AATGATGAAA CTATCAGTAA TGTATTGGCA
AAAGGCACTT GGCAGATAGA CTCGATTCAA TCGTTAAGCG CCAATCTGCG TTATTACAAC
AACAGTGCAA TAGAGCCAAA GAATCCGCAA ACCAGCGCAC CATCCAGTAC CAATGTCATG
ACCAATCGTT CAACGATCCA GCGTGATGCC CAGCTCAGAT ATAATATTAA GCCTCTCGAT
CAAGAATGGT TGAATGCCAC GGCACAGGTT TATTACTCCG AAGTGGAAAT CAATGCCCGT
CCACAAGGTT CAGCCGAAGA AGGCCGCGAG CAGACAACCG AAGGTGTGAA GCTGGAAAAC
CGTACCCGTC TGTTTATCGA AAGCCCAGCC TCCCACTTGC TGACCTATGG TACTGAAACC
TATAAACAGG AACAGACCCC CGGTGGGGCA ACGGAAAGTT TCCCACAGGC CAAAATTCGG
TTTAGTTCGG GCTGGCTACA AGATGAAATC ACCTTACGCG ACCTGCCTGT CTCCATATTA
GCCGGTACGC GTTATGACAA TTACAGTGGT AGCAGCGATG GCTATGCCGA TGTCGATGCC
GATAAATGGT CATCACGTGG TGCAATCAGC ATTACACCAA CTGATTGGCT GATGCTGTTT
GGCTCCTATG CTCAGGCTTT CCGCGCCCCA ACCATGGGTG AGATGTATAA CGATTCCAAA
CACTTTGCGA TCCCTATCCG GCCTGGGTTG ACACTCACCA ACTATTGGGT CCCCAACCCA
AATCTGAAAC CAGAAACCAA TGAGACCCAG GAATACGGTT TTGGCCTACG TTTCAGTGAT
TTACTGATGG CTGAAGATGA CCTGCAATTT AAAGTCAGTT ACTTCGATAC CAAGGCTAAA
GACTACATCA GTACCCGCGT TGACATGCAA GCCATGACCA CCACATCGGT GAATATCGAT
CAGGCAAAAA TCTGGGGTTG GGATGCCAGC ATGAGCTATA AAACGGCCTT GTTTAACTGG
GATCTGGCCT ATAACCGCAC CCGTGGTAAA AATCAGAATA CCGATGAATG GCTCGACACC
ATCAACCCGG ATACCGTCAC CAGTATCGTT GATGTACCTG TCGCCAACAG TGGTTTCTCC
GTCGGTTGGA TTGGGACCTT CGCTAATCGC TCCAGCCGCG TTTCCAGTTC AACACCGCAA
GCCGGTTATG GCGTCAATGA TTTCTATGTG AGCTATAAAG GCCAGGAAGC ATTCAAAGGC
ATGACCACAA CAATGTTATT GGGTAATGTC TTCGAAAAAG AGTATTACAC GCCACAAGGC
ATCCCACAAG ATGGCCGTAA CGTGAAATTT TTCGTGAGTT ATCAGTGGTA G
 
Protein sequence
MLRSTSDRFR WSSLSLAIAC TLPLATQAAD TTTTQTSSKK HSTDTMVVTA TGNERSSFEA 
PMMVTVIEGN APTSQTAATA ADMLRQVPGL TVTGSGRTNG QDVVMRGYGK QGVLTLVDGV
RQGTDTGHLN STFLDPALVK RIEIVRGPAA LLYGSGALGG VIAYETVDAA DMLQPGQNSG
YRVYSSAATG DHSFGLGASA FGRTDDLDGI LSFGTRDIGN IRQSNGFNAP NDETISNVLA
KGTWQIDSIQ SLSANLRYYN NSAIEPKNPQ TSAPSSTNVM TNRSTIQRDA QLRYNIKPLD
QEWLNATAQV YYSEVEINAR PQGSAEEGRE QTTEGVKLEN RTRLFIESPA SHLLTYGTET
YKQEQTPGGA TESFPQAKIR FSSGWLQDEI TLRDLPVSIL AGTRYDNYSG SSDGYADVDA
DKWSSRGAIS ITPTDWLMLF GSYAQAFRAP TMGEMYNDSK HFAIPIRPGL TLTNYWVPNP
NLKPETNETQ EYGFGLRFSD LLMAEDDLQF KVSYFDTKAK DYISTRVDMQ AMTTTSVNID
QAKIWGWDAS MSYKTALFNW DLAYNRTRGK NQNTDEWLDT INPDTVTSIV DVPVANSGFS
VGWIGTFANR SSRVSSSTPQ AGYGVNDFYV SYKGQEAFKG MTTTMLLGNV FEKEYYTPQG
IPQDGRNVKF FVSYQW