| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0645 |
|---|
| Symbol | metC2 |
|---|
| ID | 5799107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 648290 |
|---|
| End bp | 649471 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641338646 |
|---|
| Product | cystathionine beta-lyase |
|---|
| Protein accession | YP_001605227 |
|---|
| Protein GI | 162419677 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.186221 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AAGATATTTC TAGTTTTGGT ATTAGTACTC AAATAACACA ACTGGGTAGA
AATCCACAAG AGCAGACGGG TTTTGTTAAT ACACCGATCT ATCGGGGGTC CACGGTTATT
TTTAATACGG TCGATGACAT TGTCAATAAT CGTGCTGTTT TTAACTATGG GACAGCAGGT
ACTCCCACTA TTGCTAATCT AGAGAGTGCG TGGACCGCAC TGGCTGGGGC TGCAGGAACC
GTGATTTCCC CTTCTGGCTT GGGGGTGATC GCGTTAGCAT TGTTAACAAC GCTAAAAGCG
GGTGATCACT TGTTGATGCC AGATAGTGTG TATAAACCGA CAAGGTTACT CTGTGCGGGT
TTGATCGCTC GGATGGGGGT TGAAACAACA TATTATGACC CATTGATCGG TGCTGAAATT
GAAACATTAA TGAAGCCGAA TACATCGACG TTATTTTTGG AGTCTCCTGG CTCACAAAGC
TTCGAAATTC AGGATATTCC GATGATGACG GCAATCACTA AAAGGCGAGG GATTGCGACA
ATTATTGATA ATACTTGGGC TTCACCGCTA TTTTTTGCCG CCCATAAACA TGGCTGTGAT
TTATCACTTG AGGCGGGTAC CAAATATTTG GGCGGGCACT CTGACCTATT AATGGGGCTG
GTGTCGGCGA ACGAACAATG GTGGCCTAAA TTAAGGGAGA CTTATGACTC TATGGCCATG
CTACCGGGGG CTGAGGACTG TTTCTTAGCA TTACGTGGCT TAAGGACCCT ACATCTACGA
ATAAAAGAGG CAGAAAAGCG CGGACTTGAA ATGGCGCAAT GGCTGAAAGA GCGGCCAGAA
GTGTTGCGTG TTTTACATCC GGCCTTTCCT GATTGCCCTG GACATGAGTT TTGGAAACGT
GATTTTACCG GGTCATCAGG TCTATTCTCT ATTGTATTAA AGCCCGAATT TACTCAAAAA
GGGTTGGCGG AGATGTTGGA CAATATGTCT ATCTTTGCTA TGGGTTTCTC TTGGGGGGGA
TATGAGAGCC TGGTGATCCC TTTTGATTGC TCGGAATACC GCACGGTGAC GAAATGGAAC
CCAGGTGGAT TAACCATCCG CTTACAAATC GGTCTTGAGG ATATGGAGGA TCTCAAGGAG
GACTTGGCGC AAGGTTTTAT TCGGTTAGCA TCAAATAGTT AA
|
|---|
| Protein sequence | MNKKDISSFG ISTQITQLGR NPQEQTGFVN TPIYRGSTVI FNTVDDIVNN RAVFNYGTAG
TPTIANLESA WTALAGAAGT VISPSGLGVI ALALLTTLKA GDHLLMPDSV YKPTRLLCAG
LIARMGVETT YYDPLIGAEI ETLMKPNTST LFLESPGSQS FEIQDIPMMT AITKRRGIAT
IIDNTWASPL FFAAHKHGCD LSLEAGTKYL GGHSDLLMGL VSANEQWWPK LRETYDSMAM
LPGAEDCFLA LRGLRTLHLR IKEAEKRGLE MAQWLKERPE VLRVLHPAFP DCPGHEFWKR
DFTGSSGLFS IVLKPEFTQK GLAEMLDNMS IFAMGFSWGG YESLVIPFDC SEYRTVTKWN
PGGLTIRLQI GLEDMEDLKE DLAQGFIRLA SNS
|
|---|
| |