Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0613 |
Symbol | rsmB |
ID | 5799076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 623080 |
End bp | 624387 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641338616 |
Product | 16S rRNA methyltransferase B |
Protein accession | YP_001605204 |
Protein GI | 162420599 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0175887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0518778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAGCTT TTTTGGTTAT GAAAAATACA TATAATCTCC GCAGTATCGC TGCTAAAGCA ATTAGTCAGG TATTGGATCA GGGCCAATCG CTCAGTGCCG TTTTGCCTGA ATTACAAAAA AATATTTCCG ATAAAGATCG CGCATTGCTG CAGGAACTGT GTTTTGGCAC TCTGCGAGTC TTACCACAGC TAGAATGGTG TATTCAACAA CTTATGGCAC GCCCGATGAC GGGTAAACAA CGTGTTTTTC ATTACCTGAT TATGGTTGGG CTCTATCAGT TGATTTACAC TCGGATTCCG CCACATGCGG CGTTGGCTGA AACGGTCGAA GGCGCAACAG TACTGAAACG TCCACAATTA AAAGGACTTA TCAATGGTGT ATTACGCCAA TTTCAGCGTC AACAAGTGGA ATTACTGGAA CGTGCTGTAA ATAACGATAG CCACTATCTG CATCCTAGTT GGTTGTTGGC CCGCATTAAA CAAGCCTATC CAGCACAGTG GCAGCAAATT TTGGATGCCA ATAACCAAAG ACCGCCCATG TGGCTACGTG TAAATCGCCA GCATCATTCT CGTAGTGAAT ACCTCGAACT GTTAACACAG GCTGATATTA ATGCGGAGCC TCACCCTATT TATCGTGATG CTGTGCGCCT TATCACTCCT TGTGCCGTCA ATCATCTACC TGGCTTTGAA CTTGGTTGGG TAACCGTACA AGATGCTTCG GCTCAAGGTT GTGTTGACCT ACTCGATCCC CAAAATGGTG AGCAGATCCT TGATTTATGT GCAGCCCCTG GAGGTAAAAC CACTCATATT CTGGAAGCCG CACCAAAGGC TCATGTATTA GCCGTAGATA TTGATGAACA GCGACTCAGC CGAGTTAAAG AGAATTTACA ACGCCTGCAA TTACAAGCCG TAGTCCGTGT TGGTGATGGC CGAGCACCTG ACACATGGTG CGGTGATCAG CAATTTGATC GTATTCTATT GGATGCACCT TGTTCTGCAA CCGGTGTTAT TCGCCGCCAT CCAGATATTA AATGGCTGCG TCGGGACCGT GATATTTCCG AATTGGCCCA ACTACAATCA GAAATCATTG AGGCTATTTG GCCTAAACTG AAACATGGTG GAGTACTAGT TTATGCTACC TGTTCAATAT TGCCGGAAGA GAACCAACAG CAGATTGCCG CTTTCCTACA ACGGCATCCC GAAGCACAGT TGACCGAAAC CGGTACTACA GCAGCGCCTG GTAAACAAAA CCTTCCACAT CCTGAGGACG GTGATGGTTT CTTCTACGCA AAGATAATCA AAAAATAG
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Protein sequence | MSAFLVMKNT YNLRSIAAKA ISQVLDQGQS LSAVLPELQK NISDKDRALL QELCFGTLRV LPQLEWCIQQ LMARPMTGKQ RVFHYLIMVG LYQLIYTRIP PHAALAETVE GATVLKRPQL KGLINGVLRQ FQRQQVELLE RAVNNDSHYL HPSWLLARIK QAYPAQWQQI LDANNQRPPM WLRVNRQHHS RSEYLELLTQ ADINAEPHPI YRDAVRLITP CAVNHLPGFE LGWVTVQDAS AQGCVDLLDP QNGEQILDLC AAPGGKTTHI LEAAPKAHVL AVDIDEQRLS RVKENLQRLQ LQAVVRVGDG RAPDTWCGDQ QFDRILLDAP CSATGVIRRH PDIKWLRRDR DISELAQLQS EIIEAIWPKL KHGGVLVYAT CSILPEENQQ QIAAFLQRHP EAQLTETGTT AAPGKQNLPH PEDGDGFFYA KIIKK
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