| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0606 |
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| Symbol | rpoA |
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| ID | 5799069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 617084 |
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| End bp | 618073 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641338609 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001605197 |
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| Protein GI | 162420536 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000361022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.442145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGTT CTGTGACAGA GTTTCTAAAA CCGCGCCTGG TAGATATCGA GCAAGTCAGT
TCGACGCACG CCAAGGTGAC CCTTGAGCCG TTAGAGCGTG GCTTTGGCCA TACTCTCGGC
AACGCACTGC GCCGTATTCT GCTTTCATCT ATGCCGGGTT GCGCGGTGAC CGAGGTTGAG
ATTGATGGTG TACTACATGA GTACAGCACC AAAGAAGGCG TACAGGAAGA TATCCTGGAG
ATCCTGCTCA ACCTGAAAGG GCTGGCGGTG AGAGTTCAGG GCAAAGATGA AGTTATTCTT
ACCCTGAATA AATCTGGCAT TGGCCCTGTG ACTGCAGCCG ATATCACCCA TGATGGTGAT
GTCGAAATCG TCAAGCCGCA GCACGTTATC TGCCACCTGA CCGATGAAAA CGCATCTATT
AATATGCGTA TCAAAGTTCA GCGTGGTCGT GGTTATGTGC CGGCTTCTGC CCGAATTCAT
TCGGAAGAAG ATGAGCGCCC GATTGGTCGT CTGTTAGTAG ACGCATGCTA TAGCCCTGTA
GAGCGAATTG CCTACAATGT TGAAGCAGCG CGTGTAGAAC AGCGTACCGA CCTGGACAAG
TTGGTTATCG AGATGGAAAC CAATGGTACG ATCGATCCTG AAGAGGCGAT CCGCCGTGCG
GCAACTATCT TGGCTGAACA GCTTGAAGCT TTCGTTGACC TACGTGATGT ACGTCAGCCG
GAAGTTAAAG AAGAGAAGCC AGAGTTCGAT CCGATCCTGC TGCGCCCTGT TGACGATCTG
GAATTGACTG TCCGCTCTGC TAACTGCCTT AAGGCAGAAG CTATCCACTA CATCGGTGAT
CTGGTACAGC GTACCGAGGT TGAGTTGCTG AAAACGCCGA ACCTGGGTAA AAAATCTCTT
ACTGAGATTA AAGACGTGCT CGCTTCACGT GGTCTTTCTT TAGGCATGCG CCTAGAAAAT
TGGCCACCAG CTAGCATTGC TGACGAGTAA
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| Protein sequence | MQGSVTEFLK PRLVDIEQVS STHAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
IDGVLHEYST KEGVQEDILE ILLNLKGLAV RVQGKDEVIL TLNKSGIGPV TAADITHDGD
VEIVKPQHVI CHLTDENASI NMRIKVQRGR GYVPASARIH SEEDERPIGR LLVDACYSPV
ERIAYNVEAA RVEQRTDLDK LVIEMETNGT IDPEEAIRRA ATILAEQLEA FVDLRDVRQP
EVKEEKPEFD PILLRPVDDL ELTVRSANCL KAEAIHYIGD LVQRTEVELL KTPNLGKKSL
TEIKDVLASR GLSLGMRLEN WPPASIADE
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