Gene YpAngola_A0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0603 
SymbolrpsM 
ID5799066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp615645 
End bp616001 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content51% 
IMG OID641338606 
Product30S ribosomal protein S13 
Protein accessionYP_001605194 
Protein GI162419404 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000101509 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.555026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCAGAAAC ATACCGTTAT CGCTTTAACT 
GCGATCTTCG GCATCGGCAA AACTCGCTCA CAGGCTATCT GTGTTGCTGC GGGTATTGCT
GAACATGTTA AGATCAGTGA GCTGTCTGAA GAGCAAATCG AGAAGCTGCG TGACGAAGTT
GCCAAGTACG TTGTAGAAGG TGATCTGCGT CGTGAGGTGA CCCTGAGCAT CAAGCGTCTG
ATGGACCTTG GGACTTATCG TGGTTTGCGT CATCGTCGTG GTCTACCAGT TCGCGGTCAG
CGTACTAAGA CCAACGCACG TACCCGTAAG GGGCCGCGTA AACCGATCAA GAAATAA
 
Protein sequence
MARIAGINIP DQKHTVIALT AIFGIGKTRS QAICVAAGIA EHVKISELSE EQIEKLRDEV 
AKYVVEGDLR REVTLSIKRL MDLGTYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK