| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0584 |
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| Symbol | rplC |
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| ID | 5799047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 605168 |
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| End bp | 605797 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641338587 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001605175 |
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| Protein GI | 162419265 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000183333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0735815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGGTT TAGTCGGTAA AAAAGTGGGC ATGACTCGTA TCTTCACTGA AGATGGCGTT
TCAATCCCAG TAACTGTTAT CGAAATTGAA GCGAACCGCG TAACTCAGGT CAAAAGCCTG
GAGAACGACG GATACCGTGC TGTGCAAGTA ACTACCGGTG CTAAAAAAGC TAACCGCGTT
ACTAAACCAG AAGCGGGTCA TTTCGCTAAA GCTGGCGTAG AAGCTGGCCG TGGTCTGTGG
GAATTCCGCC TTCCAGAAGG TCAAGAGTTT ACTGCTGGTC AAGAAATTAG CGTCGAAATT
TTTGCAGACG TTAAGAAAGT CGACGTTACA GGTACGTCTA AAGGTAAAGG TTTTGCCGGT
ACTGTTAAGC GCTGGAATTT CCGCACCCAA GATGCTACCC ATGGTAACTC CTTGTCTCAT
CGTGTTCCGG GTTCTATCGG TCAAAACCAG ACTCCGGGCA AAGTGTTTAA AGGCAAGAAA
ATGGCAGGCC ATATGGGTGA TGAACGTGTA ACTGTTCAGA GCCTGGATGT AGTACGTGTT
GACGCTGAGC GCAACCTACT GCTGGTCAAG GGCGCTGTTC CGGGAGCTAC CGGTGGCAAC
CTGATCGTAA AACCGGCTGT CAAGGCGTAA
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| Protein sequence | MIGLVGKKVG MTRIFTEDGV SIPVTVIEIE ANRVTQVKSL ENDGYRAVQV TTGAKKANRV
TKPEAGHFAK AGVEAGRGLW EFRLPEGQEF TAGQEISVEI FADVKKVDVT GTSKGKGFAG
TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGHMGDERV TVQSLDVVRV
DAERNLLLVK GAVPGATGGN LIVKPAVKA
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