| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0580 |
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| Symbol | rpoH |
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| ID | 5799043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 601947 |
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| End bp | 602804 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641338583 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001605171 |
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| Protein GI | 162418961 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000361022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.31275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAG AAATGCAAAC TTTAGCCTTA GTGCCCCAGG GTAGTCTGGA AGCCTATATT
CGGGCTGCCA ATGCCTATCC AATGCTAACT GCAGAGGAAG AACGGGAGCT GGCTGAACGG
CTGCATTACC AGGGCGATCT GGGAGCGGCT AAACAGCTTA TCCTGTCTCA CCTGCGCTTT
GTTGCTCATG TTGCCCGCAA CTATTCCGGG TACGGTTTGC CACAAGCTGA CCTTATTCAG
GAAGGTAATA TTGGCTTGAT GAAAGCGGTT CGCCGTTTTA ACCCTGAAGT CGGGGTGCGT
CTGGTGTCCT TTGCGGTTCA CTGGATCAAA GCAGAAATTC ATGAATATGT TCTGCGTAAC
TGGCGGATTG TGAAGGTTGC AACTACCAAA GCTCAGCGTA AGCTGTTCTT CAACCTGCGT
AAAACCAAGC AGCGCCTGGG CTGGTTTAAT CAGGACGAAG TAGAATTGGT CGCCAAAGAG
CTTGGCGTGA CCAGTAAAGA CGTTCGCGAG ATGGAGTCAC GCATGTCCGC TCAGGATATG
ACTTTCGATC CTTCTCCTGA TGATGAAGCA CGTGACGGCC AATTCATGGC CCCAGTCCTG
TATTTGCAGG ATAAAACCTC TGATTTTGCT GATGGCATCG AAGAGGATAA CTGGGACAGC
CACGCAGCAG ATAAACTGTC TTATGCGTTG GAAGGGTTGG ACGAGCGGAG CCAACATATT
ATTCGCGCCC GTTGGCTGGA CGATGAGAAC AAGTCCACCT TACAAGAACT GGCCGATCAG
TACGGTGTGT CTGCTGAACG TGTACGTCAG CTTGAAAAGA ACGCGATGAA AAAATTGCGT
ATGGCGATTG AAGCCTGA
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| Protein sequence | MTKEMQTLAL VPQGSLEAYI RAANAYPMLT AEEERELAER LHYQGDLGAA KQLILSHLRF
VAHVARNYSG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVELVAKE LGVTSKDVRE MESRMSAQDM
TFDPSPDDEA RDGQFMAPVL YLQDKTSDFA DGIEEDNWDS HAADKLSYAL EGLDERSQHI
IRARWLDDEN KSTLQELADQ YGVSAERVRQ LEKNAMKKLR MAIEA
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