Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0557 |
Symbol | rhtB |
ID | 5799020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 578724 |
End bp | 579344 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641338562 |
Product | homoserine/homoserine lactone efflux protein |
Protein accession | YP_001605150 |
Protein GI | 162419942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTAG ACTGGTGGTT AACCTATCTG CTGACAACAT TGATCCTCAG TCTTTCTCCC GGCTCGGGGG CCATTAACAC AATGAGCACT GCCATCAGCC ATGGTACCCG TGGGGTTGTT GCTTCCATTG GCGGGTTACA ACTGGGTCTG GCGGTGCATA TCGTCTTGGT TGGCGTCGGT CTTGGTGCCC TGGTCTCTCA ATCCTTACTG GCATTTGAAA TATTAAAGTG GCTCGGTGCG GCTTACTTAA TTTGGCTTGG TATTCAACAA TGGCGTGCAG CCGGGTCGCT TGACCTGCAT GCACTGGCAA ACAGTATGCC CAGGCGTAAG CTGTTTAAAC GTGCGGTGTT TGTTAACCTG ACCAATCCAA AAAGCATTGT TTTTCTGGCC GCGTTATTTC CACAATTTGT ACTGCCACAG CAACCGCAGG TGGCACAGTA TTTGATTTTG GGCAGCACCA GTGTGATTGT CGATATTATC GTGATGATTG GTTATGCCAC TTTGGCTACA CGTATTGCCC GTTGGATTAA ATCGCCACAG CAAATGAAAC TCTTGAACCG AATATTTGGC GGCCTATTTA TGTTGATTGG TGCATTATTA GCCACAGCGC GCAAAGTATA A
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Protein sequence | MTLDWWLTYL LTTLILSLSP GSGAINTMST AISHGTRGVV ASIGGLQLGL AVHIVLVGVG LGALVSQSLL AFEILKWLGA AYLIWLGIQQ WRAAGSLDLH ALANSMPRRK LFKRAVFVNL TNPKSIVFLA ALFPQFVLPQ QPQVAQYLIL GSTSVIVDII VMIGYATLAT RIARWIKSPQ QMKLLNRIFG GLFMLIGALL ATARKV
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