Gene YpAngola_A0555 details

Gene Information

• Locus tag: YpAngola_A0555
• Symbol: recQ
• ID: 5799018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pestis Angola
• Kingdom: Bacteria
• Replicon accession: NC_010159
• Strand: +
• Start bp: 576114
• End bp: 577946
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641338560
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001605148
• Protein GI: 162418857
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCGACCG CAGCAGTGAT AAACAGGGAA TTACTGGCAG TGCAGGTATT GCGAGATACT 
TTTGGTTATC AGCAATTTCG GCCAGGGCAG CAGGAGATCA TCAACGCGAC ATTGTCAGGC 
CAGGATTGTC TGGTTGTGAT GCCAACTGGC GGCGGTAAGT CCTTGTGTTA TCAGATCCCT 
GCCTTGGTGA CCGATGGGCT GACATTGGTG GTTTCACCGC TTATCTCTCT GATGAAAGAT 
CAGGTTGACC AACTGTTGGC CTATGGCGTG GGCGCGGGTT GTCTAAACTC ATCGCAGACC 
CGTGAACAGC AACTGGCCGT TATGGATGGT TGCCGCAGTG GGCAGATTAA ATTGCTGTAT 
ATCGCGCCAG AACGGTTGGT GATGGAGAGT TTTCTTGATC AACTGTATCA ATGGCGACCC 
GCCTTGCTGG CAGTGGATGA GGCTCACTGT ATTTCCCAAT GGGGGCATGA TTTCCGCCCG 
GAATACCGTG CTCTTGGTCA GTTAAAGCAG CGTTTCCCTG ATCTACCGGT TATTGCATTG 
ACCGCTACGG CTGATGAAGC GACGCGTGGC GATATTGTGC GCCTGTTGAA TCTGGATCAA 
CCTCTGATTC AGATCAGTAG TTTTGATCGC CCGAATATCC GCTATACCTT AGTTGAGAAG 
TTTAAACCTC TCGATCAACT GTGGCGTTTT GTACAAGACC AGCGCGGCAA GAGCGGCATT 
ATTTACTGTA ATAGCCGAGC GAAAGTGGAA GATACGACCG CCCGTTTGCA AAGCCGTGGC 
TTGAGTGTTG CCGCCTATCA CGCCGGGCTG GATAACGAGC GCCGTGCTCA GGTGCAAGAG 
GCTTTCCAGC GCGATGACTT ACAAGTGGTG GTCGCCACCG TAGCGTTTGG AATGGGGATT 
AACAAACCGA ACGTCCGCTT TGTCGTGCAT TTTGATATCC CACGCACCAT CGAATCCTAC 
TATCAGGAAA CGGGGCGCGC CGGGCGTGAT GGCTTACCGG CTGAGGCCGT GTTGTTGTAC 
GATCCGGCAG ATATGGCGTG GTTACGCCGT TGTCTTGAAG AGAAACCTGC GGGTGCTCAG 
CAAGATATCG AACGGCATAA ACTCAATGCG ATGGGGGCAT TTGCCGAAGC GCAAACCTGT 
CGCCGTTTGG TGCTGCTCAA CTATTTTGGT GAAGGTAAAC AGCAGCCATG CGGTAACTGC 
GATATTTGTC TGGATCCGCC AAAGCGCTAC GATGGTCTGG CAGATGCGCA AAAGGCGCTC 
TCTTGCGTCT ATCGGGTAGG GCAACGCTTT GGCTTAGGGT ACATCGTTGA GGTGCTGCGT 
GGGGCGAATA ACCAGCGTAT TCGTGAGATG GGCCATGACA AGCTTTCGGT GTACGGCATT 
GGCCGTGAGC AAACCCATGA ACACTGGGTC AGCGTCTTGC GCCAGTTGAT CCATTTGGGG 
CTGCTCAGCC AGAATATTGC CCAGTTCTCT GCCTTGCAAC TGACTGAAGC GGCGCGCCCG 
GTCTTACGCG CAGAGCTGCC ATTACAACTG GCGGTACCGC GTATTCAGAG CCTGAAAGTG 
CGTAGCAGTG CCAATCAGAA ATCCTATGGT GGCAATTATG ATCGCAAGTT GTTCGCTAAG 
CTGCGCAAAC TGCGTAAATC AATTGCTGAT GAAGGCAATA TCCCGCCTTA TGTGGTGTTT 
AACGATGCGA CCTTGCTGGA GATGGCTGAG CAGATGCCGA TTACTGCCAG CGAGCTATTG 
AGCGTGAATG GTGTCGGTCA GCGTAAACTA GAACGTTTTG GTGCACCATT TATGGCCCTG 
ATCCGTGATC ATGTGGATAA CAACGATGAC TAA 

 

Protein sequence

MSTAAVINRE LLAVQVLRDT FGYQQFRPGQ QEIINATLSG QDCLVVMPTG GGKSLCYQIP 
ALVTDGLTLV VSPLISLMKD QVDQLLAYGV GAGCLNSSQT REQQLAVMDG CRSGQIKLLY 
IAPERLVMES FLDQLYQWRP ALLAVDEAHC ISQWGHDFRP EYRALGQLKQ RFPDLPVIAL 
TATADEATRG DIVRLLNLDQ PLIQISSFDR PNIRYTLVEK FKPLDQLWRF VQDQRGKSGI 
IYCNSRAKVE DTTARLQSRG LSVAAYHAGL DNERRAQVQE AFQRDDLQVV VATVAFGMGI 
NKPNVRFVVH FDIPRTIESY YQETGRAGRD GLPAEAVLLY DPADMAWLRR CLEEKPAGAQ 
QDIERHKLNA MGAFAEAQTC RRLVLLNYFG EGKQQPCGNC DICLDPPKRY DGLADAQKAL 
SCVYRVGQRF GLGYIVEVLR GANNQRIREM GHDKLSVYGI GREQTHEHWV SVLRQLIHLG 
LLSQNIAQFS ALQLTEAARP VLRAELPLQL AVPRIQSLKV RSSANQKSYG GNYDRKLFAK 
LRKLRKSIAD EGNIPPYVVF NDATLLEMAE QMPITASELL SVNGVGQRKL ERFGAPFMAL 
IRDHVDNNDD