Gene YpAngola_A0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0545 
SymboluvrD 
ID5799008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp565617 
End bp567779 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content55% 
IMG OID641338550 
ProductDNA-dependent helicase II 
Protein accessionYP_001605138 
Protein GI162418460 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01075] DNA helicase II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTT CTGATCTGCT CGACAGCCTG AATGAAAAAC AACGTGACGC CGTGGCCGCG 
CCGCGCGGCA ACTTGTTGGT ACTGGCCGGT GCAGGCAGTG GCAAAACGCG GGTGCTGGTT
CACCGTATCG CCTGGCTGTT GTCGGTAGAG AATGCCTCGC CGTATTCGAT TATCTCGGTA
ACCTTTACCA ATAAAGCGGC GGCTGAAATG CGCCACCGTA TTGAACATCT GATTGGCACC
AGCCAAGGCG GGATGTGGAT CGGGACTTTC CACGGTTTGG CGCACCGTCT GCTGCGTGCT
CACCATCTGG ATGCCAATCT GCCACAAGAT TTTCAAATCC TGGATAGCGA TGACCAACTG
CGGTTATTGA AACGCCTGGT CAAAGCACTC AATTTGGATG AGAAACAATG GCCCCCGCGT
CAGGCGATGT GGTACATCAA CGGCAAAAAA GACGAAGGGC TGCGCCCGCA ACATATTGAG
AGCTACGGTA ATCCGGTTGA GGCCACCTGG CTACGTATCT ATCAGGCTTA TCAGGAAGCG
TGCGACCGCG CGGGTCTGGT TGATTTTGCC GAGCTGTTGC TACGAGCGCA CGAGCTGTGG
CTGAACAAAC CACATATTCT TAATCATTAT CGTGAACGCT TTACCAACAT TTTGGTGGAT
GAGTTTCAGG ATACCAACAA CATCCAATAT GCCTGGATCC GCTTGTTGGC CGGTGAACGT
TCCAATGTGA TGATCGTCGG CGACGATGAC CAGTCAATCT ATGGTTGGCG CGGCGCGCAG
GTCGAGAATA TCCAACGTTT CTTGAAGGAT TTCCCCGGTG CGGAGACCAT CCGCCTGGAG
CAGAATTACC GCTCGACCAG CATCATTCTG GCTGCCGCCA ATGCCCTGAT TGCCAACAAT
GACGGCCGCA TGGGTAAAAA TCTGTGGACC GATGGCGCGG AGGGCGAACC TATCTCCCTC
TATTGTGCGT TTAACGAGTT AGATGAAGCC CGTTTTGTGG TCAATCGTAT CAAAGCCTGG
CAGGACAACG GCGGTGTGCT GAATGATTGT GCCATTTTGT ACCGTAGCAA CGCCCAATCG
CGCGTATTAG AAGAAGCGTT ACTGCAAACG GCAACCCCGT ACCGTATTTA TGGGGGGCAG
CGCTTCTTCG ACCGCCAGGA AATTAAAGAC TCACTGGCTT ATCTGCGCCT GATCTCCAAT
CGTAATGACG ACGCCGCGTT TGAACGGGTG GTGAATACAC CCACTCGGGG GATTGGCGAT
CGCACATTGG ATGTGGTGCG TCAAACCGCC CGTGACCGCC AGTTAACGCT ATGGCAATCA
ACCCGTGCCA TGTTGCAGGA AAAAGTGCTG GCAGGGCGTG CCGCGTCCGC ATTACAACGC
TTTGTCGAGC TGATCGATTC ACTGGCGCGC GAAACGGCTG ATATGCCGCT ACACGTGCAA
ACTGATCGCG TTATTCGTGA TTCTGGCTTG TGGTCGATGT ACGAACAGGA AAAAGGCGAG
AAAGGTCAGG CACGTATCGA GAACCTTGAA GAGCTGGTTA CGGCGACCCG TCAATACAGC
TATCAGGATG AAGATCAGGA TCTGATGCCG CTACAGGCCT TCTTATCCCA TGCGGCACTG
GAAGCCGGAG ATGGCCAGGC CGATGCCTAT CAGGATGCGG TGCAATTAAT GACTCTCCAT
TCAGCGAAAG GCTTGGAGTT TCCACAGGTA TTTATTGTGG GAATGGAAGA AGGGATGTTC
CCGAGCCAAA TGTCATTGGA TGAGGGGGGG CGTTTGGAAG AGGAGCGGCG TTTGGCCTAC
GTGGGGTTAA CCCGTGCGAT GCAGAAACTG ACGTTATGTT ACGCCGAAAG CCGCCGCCTA
TACGGTAAAG AGGTCAATCA CCGCCCTTCA CGCTTTATCG GCGAACTGCC GCAGGAGTGC
GTCGAAGAGG TCCGGCTGCG CGCCAGTGTT TCCCGCCCGG TGAATCACCG CCGAATGGGG
ACTCCGATGC ACGAGAATGA CAGCGGTTTC TCATTGGGCC AGCGAGTGCG GCACCCTAAA
TTTGGCGAGG GTACTATTGT GAATTTGGAA GGCAGTGGTG AGCACAACCG GTTGCAGGTT
GCCTTCCCCG GAGAGGGGAT TAAGTGGCTG GTCGCGGCCT ATGCGCGTCT GGAACCCGTG
TAA
 
Protein sequence
MDVSDLLDSL NEKQRDAVAA PRGNLLVLAG AGSGKTRVLV HRIAWLLSVE NASPYSIISV 
TFTNKAAAEM RHRIEHLIGT SQGGMWIGTF HGLAHRLLRA HHLDANLPQD FQILDSDDQL
RLLKRLVKAL NLDEKQWPPR QAMWYINGKK DEGLRPQHIE SYGNPVEATW LRIYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILNHY RERFTNILVD EFQDTNNIQY AWIRLLAGER
SNVMIVGDDD QSIYGWRGAQ VENIQRFLKD FPGAETIRLE QNYRSTSIIL AAANALIANN
DGRMGKNLWT DGAEGEPISL YCAFNELDEA RFVVNRIKAW QDNGGVLNDC AILYRSNAQS
RVLEEALLQT ATPYRIYGGQ RFFDRQEIKD SLAYLRLISN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTA RDRQLTLWQS TRAMLQEKVL AGRAASALQR FVELIDSLAR ETADMPLHVQ
TDRVIRDSGL WSMYEQEKGE KGQARIENLE ELVTATRQYS YQDEDQDLMP LQAFLSHAAL
EAGDGQADAY QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGLTRAMQKL TLCYAESRRL YGKEVNHRPS RFIGELPQEC VEEVRLRASV SRPVNHRRMG
TPMHENDSGF SLGQRVRHPK FGEGTIVNLE GSGEHNRLQV AFPGEGIKWL VAAYARLEPV