Gene YpAngola_A0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0516 
SymbolrfbB 
ID5798979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp540207 
End bp541274 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID641338521 
ProductdTDP-D-glucose-4,6-dehydratase 
Protein accessionYP_001605113 
Protein GI162418754 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCGAA TTCTCGTCAC AGGCGGGGCC GGTTTTATCG GCTCTGCGGT GGTCAGGCAT 
ATTATTGATG GCACCTCAGA TAGCGTGGTG GTAGTCGATA AACTCACCTA TGCCGGTAAT
CTGGAGTCGC TGTCAGTGGT TGCGGGCAGT GAGCGTTATG CTTTCGAACA AGTCGATATC
TGTGACAGCA GTGAGTTGGA TCGGGTTTTC GCACAGTATC AGCCGAATGT GGTGATGCAT
TTGGCTGCCG AGAGCCACGT TGACCGCTCA ATTGATGGCC CCGCCGCGTT TATCGAGACG
AACGTGGTTG GCACTTACAC CCTGTTGGAA GCTGCCCGTC ACTATTGGCA ACAACTGAGT
GTTGAAGCCA AGCAGGCGTT CCGCTTTCAC CATATCTCAA CGGATGAGGT GTATGGCGAT
TTACACGGCA CTGACGATTT GTTTACCGAA ACCACGCCGT ATGCGCCAAG CAGCCCATAT
TCGGCGTCTA AAGCGTCCAG TGACCATTTA GTCCGGGCTT GGTTGCGTAC TTATGGTTTA
CCGACTTTGG TGACTAATTG TTCAAATAAT TACGGCCCGT ATCACTTCCC AGAAAAGCTG
ATCCCGCTGG TTATTTTAAA TGCGTTGGCG GGTAAGCCGC TGCCTGTTTA TGGCAATGGT
GCTCAGGTCC GCGACTGGTT GTATGTAGAA GACCACGCCA GAGCGTTGTA TCAGGTGGTT
ACTGAGGGTG TGGTGGGTGA AACCTACAAT ATCGGCGGCC ATAATGAGCG CAAGAATATT
GAAGTAGTTG AAACCATTTG CGCGCTATTG GATGAGTTGG TGCCAGCAAA ACCGGCGGGT
ATCGCACACT ACCGTGATTT GATTACCTAC GTAAAAGACC GGCCGGGTCA TGATATGCGC
TATGCCATTG ATGCTGGCAA GATTGAGCGG GAACTGGGTT GGCGTCCACA AGAAACCTTC
GAAAGCGGTA TCCGTAAAAC GGTCTTGTGG TATTTGAATA ATGAATCTTG GTGGCGTCGT
GTTCAGGATG GCTCTTACGC CGGAGAGCGT TTGGGCTTGA GTGACTAA
 
Protein sequence
MRRILVTGGA GFIGSAVVRH IIDGTSDSVV VVDKLTYAGN LESLSVVAGS ERYAFEQVDI 
CDSSELDRVF AQYQPNVVMH LAAESHVDRS IDGPAAFIET NVVGTYTLLE AARHYWQQLS
VEAKQAFRFH HISTDEVYGD LHGTDDLFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL
PTLVTNCSNN YGPYHFPEKL IPLVILNALA GKPLPVYGNG AQVRDWLYVE DHARALYQVV
TEGVVGETYN IGGHNERKNI EVVETICALL DELVPAKPAG IAHYRDLITY VKDRPGHDMR
YAIDAGKIER ELGWRPQETF ESGIRKTVLW YLNNESWWRR VQDGSYAGER LGLSD