| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0509 |
|---|
| Symbol | rhlB |
|---|
| ID | 5798972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 531273 |
|---|
| End bp | 532544 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641338514 |
|---|
| Product | ATP-dependent RNA helicase RhlB |
|---|
| Protein accession | YP_001605106 |
|---|
| Protein GI | 162418242 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0308168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGAAC AGAAGTTTTC CGACTTCGCC CTGCACCCGC TAGTTGTTGA AGCCCTTGAA
AACAAAGGGT TTCAGTATTG CACGCCGATT CAGGCGTTAG CATTGCCACT CACCCTCTCT
GGGCGTGATG TAGCAGGTCA GGCGCAAACC GGTACAGGCA AGACGCTGGC ATTCTTGGCG
TCTACTTTCC ATTATTTGCT TTCTCACCCA GCAGAAGAGG GTCGCCAGAC TAATCAACCA
CGCGCATTAA TTATGGCACC AACGCGCGAA TTAGCCGTGC AAATTCACTC CGATGCAGAA
TCACTTTCCC AGGTAACCGG GCTGAAGTTA GGTCTGGCTT ATGGTGGGGA TGGCTACGAT
AAACAGCTTA AAGTGCTGGA AAGTGGCGTT GATATCTTGA TCGGTACAAC AGGCCGTTTA
ATCGATTACG CGAAACAAAA TTATATTAAC CTCGGTGCGA TTCAAGTCGT GGTATTGGAT
GAAGCGGATC GCATGTACGA TCTAGGCTTT ATTAAAGATA TCCGCTGGCT GTTCCGCCGT
ATGCCTTCCG TTGATAAACG TTTAAATATG CTGTTTTCTG CCACTCTCTC GTATCGGGTA
CGTGAATTGG CATTCGAACA AATGAATAAT GCAGAATATG TTGAAGTGGA ACCGTTACAA
AAAACCGGTC ACCGCATCAA AGAAGAGCTG TTCTATCCTT CAAATGAAGA AAAAATGCGT
CTGTTACAGA CGTTAATTGA AGAAGAATGG CCTGATCGCT GTATTATTTT TGCTAATACC
AAACACCGTT GTGAAGAGAT CTGGGGGCAT TTGGCTGCTG ATGGTCACCG CGTCGGTTTA
TTGACGGGTG ATGTTGCTCA GAAAAAACGC CTGCGTATTC TCGAAGATTT CACCAAGGGC
GATTTGGATA TTCTGGTTGC CACCGATGTT GCTGCCCGTG GTTTACACAT TCCATTAGTG
ACCCACGTCT TCAACTATGA CCTGCCAGAT GACTGTGAAG ATTACGTTCA CCGCATTGGC
CGTACTGGCC GTGCTGGCGA GAGTGGTCAC TCCATCAGTC TGGCCTGCGA AGAGTATGCA
TTAAACTTGC CAGCGATTGA GACCTATACG GGCCATAGCA TCCCGGTAAG CAAATATAAC
AGTGACGCGC TATTAACTGA TCTACCAGCG CCTAAACGCC TAGCCCGTAC CCGCACCGGG
AATGGCCCAC GCCGTAATTC TGCCCCACGC CGCAGTGGAG CACCACGGAA TAACCGTAAG
CGACCAGGCT GA
|
|---|
| Protein sequence | MTEQKFSDFA LHPLVVEALE NKGFQYCTPI QALALPLTLS GRDVAGQAQT GTGKTLAFLA
STFHYLLSHP AEEGRQTNQP RALIMAPTRE LAVQIHSDAE SLSQVTGLKL GLAYGGDGYD
KQLKVLESGV DILIGTTGRL IDYAKQNYIN LGAIQVVVLD EADRMYDLGF IKDIRWLFRR
MPSVDKRLNM LFSATLSYRV RELAFEQMNN AEYVEVEPLQ KTGHRIKEEL FYPSNEEKMR
LLQTLIEEEW PDRCIIFANT KHRCEEIWGH LAADGHRVGL LTGDVAQKKR LRILEDFTKG
DLDILVATDV AARGLHIPLV THVFNYDLPD DCEDYVHRIG RTGRAGESGH SISLACEEYA
LNLPAIETYT GHSIPVSKYN SDALLTDLPA PKRLARTRTG NGPRRNSAPR RSGAPRNNRK
RPG
|
|---|
| |