Gene YpAngola_A0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0486 
SymbolilvA 
ID5798949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp507810 
End bp509354 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content54% 
IMG OID641338491 
Productthreonine dehydratase 
Protein accessionYP_001605083 
Protein GI162421727 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.824799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.345078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTT CGCAACCCTT ATCTGCTGCC CCCTGCGGGG CAGAATATCT GCGGGCGATA 
TTACGTGCGC CGGTGTATGA GGTGGCGCAA GTCACCCCGT TACAAGTGAT GGAGAAAATC
TCCTCGCGCG TGGGTAATAC CGTTTTAGTG AAGCGTGAAG ATCGGCAGCC GGTACACAGC
TTTAAGTTGC GCGGTGCTTA CGCGATGATC TCCAGCCTGA CGGAAGAGCA GAAAGCCTGT
GGCGTCGTCA CGGCTTCTGC GGGTAACCAT GCTCAAGGCG TGGCGCTTTC TGCCCATAAA
ATGGGGATTA AAGCGCTGAT CGTCATGCCC GTTGCTACTG CAGATATTAA AGTTGATGCG
GTACGTGCTT TTGGCGGCGA GGTGCTGCTG TTTGGCGCTA ATTTTGATGA AGCCAAAACC
AAAGCTATCG CGCTTGCTCA AGAGCAGGGC TACACCTTTG TGCCACCGTT TGACCATCCG
GCGGTGATTG CCGGGCAGGG GACGCTGGCG ATGGAGTTAC TGCAACAAGA TGCCCATCTT
GATCGGGTTT TTGTCCCAGT GGGCGGCGGT GGGCTGGTGG CCGGTGTGGC GGTGCTTATC
AAGCAATTGA TGCCACAGAT TAAAGTGATT GGTGTTGAAG CCGAGGATTC TGCCTGTTTG
CGGGCCGCGC TGGATGCGGG GCAGCCGGTC GATTTGGCGC GTGTCGGGCT GTTTGCCGAG
GGCGTGGCAG TTAAGCGTAT CGGTGACGAG CCTTTCCGCC TGTGTCAGGA ATATCTGGAC
GATGTGATCA CCGTTGACAG TGATGCTATC TGTGCCGCAG TCAAAGATCT GTTTGAGGAT
GTTCGCGCCA TTGCTGAGCC TTCTGGTGCG TTGGCATTGG CGGGCCTGAA AAAATATGTG
CAGCAGCATA ATATTCAGGG CGAGCGTCTG GCACATGTGC TTTCTGGTGC AAACGTGAAC
TTCCATGGTT TGCGTTATGT GTCAGAGCGT TGCGAGTTAG GTGAGCAGCG TGAAGCCCTG
CTGGCGGTGA CTATTCCAGA GCAAAAGGGC AGTTTCCTGC GTTTCTGTGA ATTACTGGGT
GGCCGTTCGG TAACGGAATT TAACTACCGT TACGCCGATG CTGAAAACGC CTGCATTTTT
GTTGGGGTAC GTTTGACTCG TGGTTATGCT GAGCGGGTTG AAATTCTTGC TGAATTGCAG
GACAAAGGTT ATCAGGTGGT CGATTTATCT GATGACGAAA TGGCGAAACT GCATGTGCGT
TATATGGTTG GTGGGCGGCC CTCGAAACCA CTGCGTGAGC GCCTGTTCAG CTTTGAATTC
CCCGAGTCAC CAGGCGCTTT GCTGAAATTC CTGCATACGT TGGGCACTCA CTGGAATATT
TCTCTGTTCC ACTACCGCAG CCATGGCACA GATTTTGGCC GGGTATTGGC GGCATTTGAG
TTGTCGGCTA CCGAACCGCA ATTTGAAGAG CGCTTAGCGG CTCTGGGCTA CTATTGCCAC
GATGAAACGG ATAACCCGGC GTTTAAGTTC TTTTTAGCGG GTTAA
 
Protein sequence
MAVSQPLSAA PCGAEYLRAI LRAPVYEVAQ VTPLQVMEKI SSRVGNTVLV KREDRQPVHS 
FKLRGAYAMI SSLTEEQKAC GVVTASAGNH AQGVALSAHK MGIKALIVMP VATADIKVDA
VRAFGGEVLL FGANFDEAKT KAIALAQEQG YTFVPPFDHP AVIAGQGTLA MELLQQDAHL
DRVFVPVGGG GLVAGVAVLI KQLMPQIKVI GVEAEDSACL RAALDAGQPV DLARVGLFAE
GVAVKRIGDE PFRLCQEYLD DVITVDSDAI CAAVKDLFED VRAIAEPSGA LALAGLKKYV
QQHNIQGERL AHVLSGANVN FHGLRYVSER CELGEQREAL LAVTIPEQKG SFLRFCELLG
GRSVTEFNYR YADAENACIF VGVRLTRGYA ERVEILAELQ DKGYQVVDLS DDEMAKLHVR
YMVGGRPSKP LRERLFSFEF PESPGALLKF LHTLGTHWNI SLFHYRSHGT DFGRVLAAFE
LSATEPQFEE RLAALGYYCH DETDNPAFKF FLAG