Gene YpAngola_A0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0459 
SymbolhemE 
ID5798923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp480720 
End bp481787 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID641338465 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001605064 
Protein GI162421492 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000960348 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGAGT TGAAAAACGA TCGCTATCTG CGTGCTTTGC TACGTCAGCC TGTAGACATG 
ACACCGGTAT GGATGATGCG GCAGGCAGGC CGTTATTTGC CAGAATATAA AGCAACCCGC
GCTATTGCTG GGGATTTTAT GTCACTGTGC AAAAATGCAG AGTTAGCCTG TGAGGTCACG
ATGCAGCCAC TGCGTCGTTA TCCGCTGGAT GCAGCGATTC TGTTTTCCGA CATTCTGACC
ATCCCTGATG CCATGGGGCT GGGGCTCTAT TTTGAAACTG GCGAAGGCCC GCGTTTTCAA
TCCCCAATTA CTTGCCGGGC TGATGTTGAA AAATTGCCGA TCCCCGATCC TGAGCAAGAA
TTGGGTTATG TGATGAATGC GGTGCGGACC ATTCGTCGCG AACTGGCCGG TTCGGTGCCC
TTAATCGGTT TTTCCGGTAG CCCATGGACT CTGGCGACCT ATATGGTTGA AGGCGGCAGT
AGTAAAGCCT TTACCAAACT GAAAAAAATG ATGTATGCCG AACCGCAGAC CTTGCACTTG
CTGCTGGATA AACTGGCAGA CAGTGTCATT TTGTATCTTA ATGCCCAAAT CAAGGCGGGG
GCTCAATCGG TCATGATCTT TGATACCTGG GGAGGGGTAC TGACAGGCCG TGATTATCAT
GAGTTCTCAT TGAATTATAT GCATAAAATT GTCGATGGTT TGATCCGCGA AAACGAAGGT
CGTCGGGTTC CTGTCACTTT GTTCACCAAG GGCGGGGGGC CGTGGCTGGA AGCGATGGCC
GCCACCGGTT GTGATGCGCT GGGTCTAGAC TGGACAACGG ATATCGCGGA TGCGCGTCGT
CGTGTTGGTG ATAAAGTTGC CTTGCAAGGC AACATGGATC CTTCGGTTCT GTATGCACCC
CCTGCGCGTA TTGAGCAGGA GGTTAGTACC ATTCTGGCGA GCTTTGGCCA GGGTGAAGGG
CATGTATTTA ATCTGGGCCA CGGGATTCAC CAAGATGTAC CTCCAGCACA TGCCGGTGCA
TTTGTGAACG CGGTACATGC GCTATCACGG CCTTATCATC AAAAATAA
 
Protein sequence
MNELKNDRYL RALLRQPVDM TPVWMMRQAG RYLPEYKATR AIAGDFMSLC KNAELACEVT 
MQPLRRYPLD AAILFSDILT IPDAMGLGLY FETGEGPRFQ SPITCRADVE KLPIPDPEQE
LGYVMNAVRT IRRELAGSVP LIGFSGSPWT LATYMVEGGS SKAFTKLKKM MYAEPQTLHL
LLDKLADSVI LYLNAQIKAG AQSVMIFDTW GGVLTGRDYH EFSLNYMHKI VDGLIRENEG
RRVPVTLFTK GGGPWLEAMA ATGCDALGLD WTTDIADARR RVGDKVALQG NMDPSVLYAP
PARIEQEVST ILASFGQGEG HVFNLGHGIH QDVPPAHAGA FVNAVHALSR PYHQK