Gene YpAngola_A0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0457 
SymbolnudC 
ID5798921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp478941 
End bp479723 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content50% 
IMG OID641338463 
ProductNADH pyrophosphatase 
Protein accessionYP_001605062 
Protein GI162420093 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000159305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTAC AACTTACAGG TAAAGAAAGT GGCTGGTGGA TTGTCAGTCA TGAAAATAAA 
TTATGGTTGC CGAAAGGAGA GCTACCACAA GGCAATGCCG CTAACTGGTC ATTGCAAGGC
ACGACTGCAC GGCAGATTGG TGAATGGCAA GGGCAGTCTG TGTGGCTTAT TCGCCAGATG
ATGCCTTCAG GGATGGGGTC GGTCCGGCAA TTATTGGATG TTGACCGCGG TTTATTCCAA
TTGGCAGGGC GCGGTGTGCA ATTAGCCGAA TTCTATCGTT CACATCGCTT TTGTGGCTAT
TGTGGGCATG AAATGCATGC CAGCCGGACG GAATGGGCCA GCTTATGTAA CCACTGTCGG
GAGCGCTATT ATCCGCAAAT TGCTCCTTGT GTGATTGTTG CTATTCGCCG TGGTGATGAA
ATTTTGCTGG CACAACATGT GCGCCATCGT GGCGGTATCA ATACCGTGCT GGCGGGGTTT
GTTGAAGTGG GTGAGACCCT GGAACAGGCG GTTTCACGGG AAGTGCTGGA AGAAAGTAAT
ATTCACATTA AGAACTTGCG CTACGTGACG TCACAGCCTT GGCCATTTCC TCATTCACTG
ATGATGGCAT TTATGGCGGA TTATGACAGC GGTGAATTAT GTCATGACCC GAAAGAGTTG
CTGAATGCCG GCTGGTATCG CTATGACCAA TTACCTTTGC TACCTCCACC CGGTACCGTG
GCACGCCGTC TGATTGAAGA TACGGTGGTC TTATGTCGTG AACATAGCGA TTTAAGCCAA
TAG
 
Protein sequence
MELQLTGKES GWWIVSHENK LWLPKGELPQ GNAANWSLQG TTARQIGEWQ GQSVWLIRQM 
MPSGMGSVRQ LLDVDRGLFQ LAGRGVQLAE FYRSHRFCGY CGHEMHASRT EWASLCNHCR
ERYYPQIAPC VIVAIRRGDE ILLAQHVRHR GGINTVLAGF VEVGETLEQA VSREVLEESN
IHIKNLRYVT SQPWPFPHSL MMAFMADYDS GELCHDPKEL LNAGWYRYDQ LPLLPPPGTV
ARRLIEDTVV LCREHSDLSQ