| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0436 |
|---|
| Symbol | iscR |
|---|
| ID | 5798900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 458854 |
|---|
| End bp | 459348 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641338442 |
|---|
| Product | DNA-binding transcriptional regulator IscR |
|---|
| Protein accession | YP_001605041 |
|---|
| Protein GI | 162418343 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.233934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.000107797 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA CATCCAAAGG CCGCTATGCC GTAACCGCCA TGCTTGATGT GGCATTACAT
TCCCAGGACG GGCCCGTTCC TCTGGCAGAT ATTTCGGAAC GTCAGGGGAT CTCGTTATCC
TATCTGGAAC AACTTTTTTC ACGCCTACGT AAAAATGGCT TAGTCGCCAG CGTACGCGGC
CCAGGCGGTG GTTATCTGCT GGGCAAAGAT GCATCAGCAA TCGCGGTTGG CGCGGTTATC
ACTGCCGTTG ACGAATCCGT TGATGCAACC CGTTGTCAGG GTAAAGAAGG CTGTCAGGGC
GGAAATCGCT GCCTGACACA TACCCTGTGG CGTGATTTGA GCGAGCGTAT CAGCAGCTTC
CTCAACAATA TTACATTGGC AGAACTGGTT AATAACCAAG ATATCCTAGA GGTAGCGGAT
CGTCAGAATA ACGATACGCG CCGCACGGCT AATGGCCGAC CGCAAGAGAC GATTAACGTC
AATCTGCGCG CATAA
|
|---|
| Protein sequence | MRLTSKGRYA VTAMLDVALH SQDGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVASVRG
PGGGYLLGKD ASAIAVGAVI TAVDESVDAT RCQGKEGCQG GNRCLTHTLW RDLSERISSF
LNNITLAELV NNQDILEVAD RQNNDTRRTA NGRPQETINV NLRA
|
|---|
| |