Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0431 |
Symbol | hscA |
ID | 5798895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 453767 |
End bp | 455683 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641338437 |
Product | chaperone protein HscA |
Protein accession | YP_001605036 |
Protein GI | 162418590 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0127027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAT TACAAATTAG TGAGCCGGGT TTAACCGCGG CACCACACCA ACGTCGGCTG GCTGCGGGGA TCGATTTAGG TACCACCAAT TCATTGGTGG CGACCGTGCG CAGCGGTAAA GCGCAGACGC TGGCCGATGA ACAGTTAGCC GATGAACAGT TAATAGCCGA TGAACAGTTA ATAGCAGGTC AACAGCTAAT AAATGAAAAA CAGCGGGATT TACTGCCGTC AGTGGTTCAT TATCACCCAC AGGGTATTGA TGTTGGTTGG AAGGCGCGCA ATCTGGCGGC CTTGGACCCG GTTAATACCA TCAGTTCAGT GAAACGCATG ATGGGCCGCT CTCTGGCTGA TATCGTACAG CGTTATCCCA ATTTACCTTA CCAATTCCAC GCGAGTGAAA ACGGTTTACC GATGATCCAG ACGGCGCGTG GGTTGGTGAA TCCGGTTCAG GTGTCGGCAG AGATCCTCAA AACACTGGCT CAGCGGGCGC AAGCGGCATT GGCCGGCGAG CTCGATGGCG TTGTCATTAC CGTCCCTGCG TATTTCGATG ATGCTCAGCG TCAGGGGACA AAAGACGCTG CGCGTTTGGC GGGGCTACAT GTCTTACGTT TACTGAATGA ACCCACTGCG GCAGCCATCG CCTATGGCCT GGATTCCGGT CAGGAAGGGG TGATTGCGGT TTATGATCTG GGGGGCGGGA CGTTTGATAT CTCCATTCTG CGTTTAAGCC GTGGCGTATT TGAAGTGCTG GCAACCGGTG GTGACTCGGC GCTGGGTGGC GATGATTTTG ATCACCTCTT GGCTGACTGG TTACGTGAGC AAGCCGGGGT TGCGACCCGC GATGACCACG GCATTCAACG GCAGTTACTT GATACGGCAA TTGCCGCCAA AATTGCCTTG AGTGAGGCCG AGACTGCGGT AGTTTCCGTG GCTGGCTGGC AAGGGGAGGT TACTCGTGAG CAGCTTGAGT CGCTCATTGC TCCGCAGGTA AAACGCACAC TGATGGCTTG CCGCCGCGCC TTGAAAGATG CGGGCGTCAC GGCTGATGAA ATTTTGGAAG TGGTGATGGT CGGTGGTTCG ACCCGAGTCC CGTTGGTGCG AGAGCAGGTG GGGCAATTCT TTGGCCGCAC GCCGTTGACC TCTATCGATC CCGATAAAGT GGTCGCCATT GGTGCCGCTA TTCAGGCTGA TATTCTGGTG GGCAATAAAC CGGACAGCGA CATGCTGCTG CTTGATGTGA TCCCGCTCTC CTTAGGGCTG GAAACGATGG GCGGTTTGGT GGAGAAAGTG ATCCCCCGCA ATACCACCAT TCCGGCGGCT CGAGCGCAGG AGTTCACCAC CTTCAAAGAC GGTCAGAGTG CGATGATGAT CCACGTGCTG CAAGGCGAGC GTGAATTGGT GAAGGATTGC CGTTCATTAG CCCGTTTTAC GTTGCGTGGC TTGCCTCCTT TGCCTGCGGG AGGGGCACAT ATTCGTGTCA CTTTCCAGGT GGATGCTGAC GGCTTATTAA GTGTGACAGC GATGGAGAAA TCGACGGGCG TTGAGGCATC GATTCAGGTG AAGCCATCTT ATGGGCTATC TGATGATGAA ATTGCCAATA TGATTAAAGA TTCCATGGCG AATGCGCAAA GTGATATCAC CGCCCGTAAG CTGGCGGAAC AACGGGTTGA TGCCGCCAGA GTGCTAGAGA GCCTGCAAGG CGCACTGGCA GAAGACGCCG CGTTACTCAG TGAGCAAGAA AGTGCCGCGA TCGCCCAAGC GGTCGCGTTA TTACAGCAGC AGATGCAGGG CAGCGACCCA CAAGCCATCG AAGCTGCGAT CAAAGCGTTA GATGCACAAA CGCAAGATTT TGCCGCACGC CGGATGGACG CTTCCATTCG CCGTGCTTTA GCGGGTCATT CAGTGGATGA GGTTTAA
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Protein sequence | MALLQISEPG LTAAPHQRRL AAGIDLGTTN SLVATVRSGK AQTLADEQLA DEQLIADEQL IAGQQLINEK QRDLLPSVVH YHPQGIDVGW KARNLAALDP VNTISSVKRM MGRSLADIVQ RYPNLPYQFH ASENGLPMIQ TARGLVNPVQ VSAEILKTLA QRAQAALAGE LDGVVITVPA YFDDAQRQGT KDAARLAGLH VLRLLNEPTA AAIAYGLDSG QEGVIAVYDL GGGTFDISIL RLSRGVFEVL ATGGDSALGG DDFDHLLADW LREQAGVATR DDHGIQRQLL DTAIAAKIAL SEAETAVVSV AGWQGEVTRE QLESLIAPQV KRTLMACRRA LKDAGVTADE ILEVVMVGGS TRVPLVREQV GQFFGRTPLT SIDPDKVVAI GAAIQADILV GNKPDSDMLL LDVIPLSLGL ETMGGLVEKV IPRNTTIPAA RAQEFTTFKD GQSAMMIHVL QGERELVKDC RSLARFTLRG LPPLPAGGAH IRVTFQVDAD GLLSVTAMEK STGVEASIQV KPSYGLSDDE IANMIKDSMA NAQSDITARK LAEQRVDAAR VLESLQGALA EDAALLSEQE SAAIAQAVAL LQQQMQGSDP QAIEAAIKAL DAQTQDFAAR RMDASIRRAL AGHSVDEV
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