Gene YpAngola_A0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0431 
SymbolhscA 
ID5798895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp453767 
End bp455683 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content55% 
IMG OID641338437 
Productchaperone protein HscA 
Protein accessionYP_001605036 
Protein GI162418590 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR01991] Fe-S protein assembly chaperone HscA 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0127027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAT TACAAATTAG TGAGCCGGGT TTAACCGCGG CACCACACCA ACGTCGGCTG 
GCTGCGGGGA TCGATTTAGG TACCACCAAT TCATTGGTGG CGACCGTGCG CAGCGGTAAA
GCGCAGACGC TGGCCGATGA ACAGTTAGCC GATGAACAGT TAATAGCCGA TGAACAGTTA
ATAGCAGGTC AACAGCTAAT AAATGAAAAA CAGCGGGATT TACTGCCGTC AGTGGTTCAT
TATCACCCAC AGGGTATTGA TGTTGGTTGG AAGGCGCGCA ATCTGGCGGC CTTGGACCCG
GTTAATACCA TCAGTTCAGT GAAACGCATG ATGGGCCGCT CTCTGGCTGA TATCGTACAG
CGTTATCCCA ATTTACCTTA CCAATTCCAC GCGAGTGAAA ACGGTTTACC GATGATCCAG
ACGGCGCGTG GGTTGGTGAA TCCGGTTCAG GTGTCGGCAG AGATCCTCAA AACACTGGCT
CAGCGGGCGC AAGCGGCATT GGCCGGCGAG CTCGATGGCG TTGTCATTAC CGTCCCTGCG
TATTTCGATG ATGCTCAGCG TCAGGGGACA AAAGACGCTG CGCGTTTGGC GGGGCTACAT
GTCTTACGTT TACTGAATGA ACCCACTGCG GCAGCCATCG CCTATGGCCT GGATTCCGGT
CAGGAAGGGG TGATTGCGGT TTATGATCTG GGGGGCGGGA CGTTTGATAT CTCCATTCTG
CGTTTAAGCC GTGGCGTATT TGAAGTGCTG GCAACCGGTG GTGACTCGGC GCTGGGTGGC
GATGATTTTG ATCACCTCTT GGCTGACTGG TTACGTGAGC AAGCCGGGGT TGCGACCCGC
GATGACCACG GCATTCAACG GCAGTTACTT GATACGGCAA TTGCCGCCAA AATTGCCTTG
AGTGAGGCCG AGACTGCGGT AGTTTCCGTG GCTGGCTGGC AAGGGGAGGT TACTCGTGAG
CAGCTTGAGT CGCTCATTGC TCCGCAGGTA AAACGCACAC TGATGGCTTG CCGCCGCGCC
TTGAAAGATG CGGGCGTCAC GGCTGATGAA ATTTTGGAAG TGGTGATGGT CGGTGGTTCG
ACCCGAGTCC CGTTGGTGCG AGAGCAGGTG GGGCAATTCT TTGGCCGCAC GCCGTTGACC
TCTATCGATC CCGATAAAGT GGTCGCCATT GGTGCCGCTA TTCAGGCTGA TATTCTGGTG
GGCAATAAAC CGGACAGCGA CATGCTGCTG CTTGATGTGA TCCCGCTCTC CTTAGGGCTG
GAAACGATGG GCGGTTTGGT GGAGAAAGTG ATCCCCCGCA ATACCACCAT TCCGGCGGCT
CGAGCGCAGG AGTTCACCAC CTTCAAAGAC GGTCAGAGTG CGATGATGAT CCACGTGCTG
CAAGGCGAGC GTGAATTGGT GAAGGATTGC CGTTCATTAG CCCGTTTTAC GTTGCGTGGC
TTGCCTCCTT TGCCTGCGGG AGGGGCACAT ATTCGTGTCA CTTTCCAGGT GGATGCTGAC
GGCTTATTAA GTGTGACAGC GATGGAGAAA TCGACGGGCG TTGAGGCATC GATTCAGGTG
AAGCCATCTT ATGGGCTATC TGATGATGAA ATTGCCAATA TGATTAAAGA TTCCATGGCG
AATGCGCAAA GTGATATCAC CGCCCGTAAG CTGGCGGAAC AACGGGTTGA TGCCGCCAGA
GTGCTAGAGA GCCTGCAAGG CGCACTGGCA GAAGACGCCG CGTTACTCAG TGAGCAAGAA
AGTGCCGCGA TCGCCCAAGC GGTCGCGTTA TTACAGCAGC AGATGCAGGG CAGCGACCCA
CAAGCCATCG AAGCTGCGAT CAAAGCGTTA GATGCACAAA CGCAAGATTT TGCCGCACGC
CGGATGGACG CTTCCATTCG CCGTGCTTTA GCGGGTCATT CAGTGGATGA GGTTTAA
 
Protein sequence
MALLQISEPG LTAAPHQRRL AAGIDLGTTN SLVATVRSGK AQTLADEQLA DEQLIADEQL 
IAGQQLINEK QRDLLPSVVH YHPQGIDVGW KARNLAALDP VNTISSVKRM MGRSLADIVQ
RYPNLPYQFH ASENGLPMIQ TARGLVNPVQ VSAEILKTLA QRAQAALAGE LDGVVITVPA
YFDDAQRQGT KDAARLAGLH VLRLLNEPTA AAIAYGLDSG QEGVIAVYDL GGGTFDISIL
RLSRGVFEVL ATGGDSALGG DDFDHLLADW LREQAGVATR DDHGIQRQLL DTAIAAKIAL
SEAETAVVSV AGWQGEVTRE QLESLIAPQV KRTLMACRRA LKDAGVTADE ILEVVMVGGS
TRVPLVREQV GQFFGRTPLT SIDPDKVVAI GAAIQADILV GNKPDSDMLL LDVIPLSLGL
ETMGGLVEKV IPRNTTIPAA RAQEFTTFKD GQSAMMIHVL QGERELVKDC RSLARFTLRG
LPPLPAGGAH IRVTFQVDAD GLLSVTAMEK STGVEASIQV KPSYGLSDDE IANMIKDSMA
NAQSDITARK LAEQRVDAAR VLESLQGALA EDAALLSEQE SAAIAQAVAL LQQQMQGSDP
QAIEAAIKAL DAQTQDFAAR RMDASIRRAL AGHSVDEV