Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0419 |
Symbol | |
ID | 5798883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 434785 |
End bp | 435822 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641338426 |
Product | cytoskeletal protein RodZ |
Protein accession | YP_001605025 |
Protein GI | 162418557 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00250443 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACTG AAGCCTCCCA AGATCAAACT GTTACAGAGA CGCCAGGTGT GCGCCTGCGT CAAGCCCGCG AATCATTAGG GCTAACCCAG CAGACAGTTG CAGAACGTCT GTGTCTGAAA GTATCCACAA TCCGTGATAT TGAGGAGGAT AACGCGCAAG CTAATCTCGC CTCGACATTC CACCGTGGCT ACATTCGTTC TTACGCCAAG CTGGTTCATC TTCCTGAAGA TGAGTTATTG CCTATTTTGG AGAAACAAGC GCCAGTCAGA GCGGCGAAAG TTGCCCCAAT GCAAAGTTTT TCATTGGGTA AAAAACACAA AAAACGTGAT GGCTGGTTGA TGAGTTTCAC CTGGCTTATT GTGTTGGTTG TGTTAGGTCT GACCGGAGCA TGGTGGTGGC AAAATCATCA GGCACAGCAA GCAGAGATTG CCAATATGGT TGATCAATCT TCTGCCCAAC TGTCACAAAA TGGCGGGCAA CCAGTGCCGC TAACTGATGA TAACAGCGAT GCTATTGCGC CAACGGATGC CCCGGCACCG GTAGCCAATG GTCAGCCGGT ACCACTGACA AATCATTCAG GCTCGGCAAT AACTAATTCA GCTACAACCA GTTCAGTTCC AAAAACAACT AGTACCGAAC CTGTCGATAC GGCGAATACA AATACCACAA TGCATCAGGA GGGGGCTGCG TCAGCGGCCG TTTCCCCAAG TCAGGTCCCG CAACCTGGTA TGCCCACAGG CCAACCGCCA TTACCTACAG CAGACGCAGG GGTAAGTGGT AGCGCGTCAT CTGTGGGGGC GTTAGTGATG AATTTTACAG CAGATTGTTG GTTGCAGGTT GTTGATGCAA CGGGCAAGAC GCTGTTTAGT GGCATTCAAA AAGGGGGCGC TGTCCTTAAC CTGGCGGGTA AAGCGCCCTA TAAGCTGACT ATCGGTGCAC CAGGTGCTCT GACGATTTCG TATCAGGGTA ACCCGGTAGA TTTAAGTAAG TTTATTAAGG CTAATCGCGT AGCCCGCCTG ACTGTCTGTG TAGAGTAG
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Protein sequence | MNTEASQDQT VTETPGVRLR QARESLGLTQ QTVAERLCLK VSTIRDIEED NAQANLASTF HRGYIRSYAK LVHLPEDELL PILEKQAPVR AAKVAPMQSF SLGKKHKKRD GWLMSFTWLI VLVVLGLTGA WWWQNHQAQQ AEIANMVDQS SAQLSQNGGQ PVPLTDDNSD AIAPTDAPAP VANGQPVPLT NHSGSAITNS ATTSSVPKTT STEPVDTANT NTTMHQEGAA SAAVSPSQVP QPGMPTGQPP LPTADAGVSG SASSVGALVM NFTADCWLQV VDATGKTLFS GIQKGGAVLN LAGKAPYKLT IGAPGALTIS YQGNPVDLSK FIKANRVARL TVCVE
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