| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0390 |
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| Symbol | ccmF |
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| ID | 5798854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 404258 |
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| End bp | 406228 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641338397 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001604997 |
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| Protein GI | 162419593 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.458476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTG AAATTGGCAG TTTTTTATTA TGTTTGGCGT TGGCGATTTC ACTGCTGCTG
AGTCTGTATC CACAATGGGG AGCCGCGCGT CAGGATGCCC GTATGATGGC GGTTGGCAGG
CCACTGACTT ATGGCATGTT TGCCGCGATC ACGTTGTCAT TTATCTGTCT GATATATGCA
TTTGTGGTAA ATGATTTTAC CGTCTCCTAT GTCGCGGCGA ATTCCAACTC ATATTTGCCG
ATTTATTACC GTATTGCCGC GAGTTGGGGA GCGCACGAAG GCTCCTTATT ATTATGGGTA
TTGCTGCTCA GTTGTTGGTC ATTGGCGGTA GCGCTGTTTA GCCGTTCGAT GCCAGAGGAT
GCGGTGGCGC GGGTGTTATC CGTGCTGGGA ATGATTACCG GCGGTTTTCT GCTATTTATT
ATTCTGACGT CTAACCCGTT CTCTCGCACA TTACCTGATT TTCCTATTGA TGGCCGCGAT
CTGAACCCGC TACTACAAGA TGTTGGGTTG ATTTTCCATC CCCCGCTGCT CTACATGGGG
TATGTCGGTT TCTCCGTCGC GTTTGCTTTT GCAATTGCAT CATTAATGGC CGGTAGGCTC
GACAGTGCCT GGGCGCGTTG GTCACGTCCA TGGACTCAGG CCGCATGGAT TTTCCTAACG
CTTGGCATCG TACTTGGCTC AGCGTGGGCT TATTATGAAT TGGGGTGGGG CGGCTGGTGG
TTCTGGGACC CGGTCGAAAA TGCCTCCTTT ATGCCGTGGC TGGCAGGTAC CGCACTGATT
CACTCACTGG CTGTCACGGA GAAGCGCGGT ACTTTCAAAG CGTGGACGGT ATTGTTGGCG
ATCACCGCGT TCTCCTTGTG TTTGATGGGG ACATTCTTAG TCCGCTCAGG CGTGCTGGTT
TCGGTGCACT CCTTTGCCTC TGATCCGGCC CGTGGCATGT TTATTCTGGC CTATCTGGTG
ATTGTGATTG GCGGTTCCCT GCTGCTGTAT GCGGTAAAAG GCGCGCAGGT GCGCAGCCGG
ACTCAGCATG AAGTCTTTTC CCGCGAGACT TTCCTGCTCG GCAACAATGT GTTGCTTATT
GCCGCAATGC TCGTGGTGTT GCTGGGAACA TTACTGCCAC TGGTTCACAA ACAGTTGGGA
TTGGGCAGTA TCTCCATTGG TGAACCGTTC TTTAATACGA TGTTCACTTG GTTAATGGCT
CCGATGGCAT TGCTCATGGG GATAGGGCCG CTCGTGCGTT GGCGTCGTGA TGAACCGAGC
AAACTGTGGA AGCGGTTGAG TGTGGCTCTG GTGGTCACTC TGCTGTTATC GATATCCGTA
CCGTGGCTGC TGCAAGATAG TGTCGCCGGT ATGACGGTCG TCGGGTTGAT GATGGCCATT
TGGGTGATCA TCCTGACATT AATGGAATTG CACGAACGGG CCACCCATCG TTATGGCTTC
TGGCGTGGGT TGACTCACCT TTCCCGTAGC CACTGGGGCA TGGTGTTGGG GCATCTCGGG
GTGGCGGTTA CGGTAATTGG GATTGCGTTT AGCCAGAATT ACAGTGTCGA ACGCGATGTG
CGCATGAAGG CCGGTGATAG TATCGATATC CATGATTATC ACTTCACTTT TCGCGATGTC
CACGATATCA AAGGGCCTAA CTATACCGGC GGCGTTGGCA TTATTGATGT CACCCGTAAT
GGTAAATTGG AGGCCACATT ACATGCAGAA AAACGCTATT ACAGTGTCGC CCGCTCAATG
ATGACTGAAG CAGCCATTGA TGGGGGGCTG ACCCGCGATC TTTATGCCGC CTTGGGTGAA
GAGCTGGGCG ATGGCTCATG GGCGGTCCGC TTGTATTACA AACCTTTTGT GCGTTGGATA
TGGTTTGGCG GGATCTTTAT GGCCGTCGGC GGCATCTTCT GTATGCTCGA TCCGCGCTAT
CGGATGAGTA AAAAGCTAAA ACGCGGTGCG ATACCGGAGG CAGAGTCATG A
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| Protein sequence | MIPEIGSFLL CLALAISLLL SLYPQWGAAR QDARMMAVGR PLTYGMFAAI TLSFICLIYA
FVVNDFTVSY VAANSNSYLP IYYRIAASWG AHEGSLLLWV LLLSCWSLAV ALFSRSMPED
AVARVLSVLG MITGGFLLFI ILTSNPFSRT LPDFPIDGRD LNPLLQDVGL IFHPPLLYMG
YVGFSVAFAF AIASLMAGRL DSAWARWSRP WTQAAWIFLT LGIVLGSAWA YYELGWGGWW
FWDPVENASF MPWLAGTALI HSLAVTEKRG TFKAWTVLLA ITAFSLCLMG TFLVRSGVLV
SVHSFASDPA RGMFILAYLV IVIGGSLLLY AVKGAQVRSR TQHEVFSRET FLLGNNVLLI
AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMA PMALLMGIGP LVRWRRDEPS
KLWKRLSVAL VVTLLLSISV PWLLQDSVAG MTVVGLMMAI WVIILTLMEL HERATHRYGF
WRGLTHLSRS HWGMVLGHLG VAVTVIGIAF SQNYSVERDV RMKAGDSIDI HDYHFTFRDV
HDIKGPNYTG GVGIIDVTRN GKLEATLHAE KRYYSVARSM MTEAAIDGGL TRDLYAALGE
ELGDGSWAVR LYYKPFVRWI WFGGIFMAVG GIFCMLDPRY RMSKKLKRGA IPEAES
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