Gene YpAngola_A0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0351 
SymbolhisM 
ID5798815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp364309 
End bp365025 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID641338359 
Producthistidine transport system permease HisM 
Protein accessionYP_001604959 
Protein GI162418405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0315453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA TCTTACATCA ATATTGGCAG GCATTACTTT GGAGTGATGG CTACCGCTTT 
ACCGGCATGG CGGTCACTCT CTGGTTATTA ATTTCTTCGG TCGTCATGGG GGGGTTACTG
GCGCTCCCAT TGGCGGTTGC TCGGGTGTCT GAACGGAGAT GGATCCGTTT ACCAGTATGG
ATTTTTACCT ATATATTCCG TGGTACACCG CTGTATGTGC AGCTATTGGT GTTCTATTCC
GGAATGTATA GTTTGGAGAT AATCCGAGGC AATGATCTGC TCAATGCTTT TTTTCGCAGT
GGATTAAATT GCACTATTTT AGCGCTGACG CTTAATACCT GTGCTTATAC CACTGAGATT
TTTGCCGGTG CGATCCGTTC GGTACCTCAT GGTGAAATAG AAGCAGCACG CGCCTATGGT
TTCTCACGTT TTAAATTATA CCGCTGCATT ATCTTACCTG CTGCATCGCG TATCTCTTTA
CCGGCATACA GCAATGAAGT GATCTTAATG CTGCACTCCA CCGCGCTGGC TTTTACCGCG
ACCGTACCCG ATATATTGAA AATAGCTCGC GATATTAACG CGGCGACTTA CCAACCCTTT
TATGCGTTCA GTATTGCCGC TGTACTTTAT TTGAGCATCT CCTTTACGCT AATTAGCCTG
TTCCGCCAGG CAGAAAAACG TTGGTTAGCC CATATTCAAC CTCAGGCATC GCATTAG
 
Protein sequence
MIEILHQYWQ ALLWSDGYRF TGMAVTLWLL ISSVVMGGLL ALPLAVARVS ERRWIRLPVW 
IFTYIFRGTP LYVQLLVFYS GMYSLEIIRG NDLLNAFFRS GLNCTILALT LNTCAYTTEI
FAGAIRSVPH GEIEAARAYG FSRFKLYRCI ILPAASRISL PAYSNEVILM LHSTALAFTA
TVPDILKIAR DINAATYQPF YAFSIAAVLY LSISFTLISL FRQAEKRWLA HIQPQASH