Gene YpAngola_A0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0345 
Symbol 
ID5798809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp359919 
End bp360467 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content52% 
IMG OID641338353 
ProductNUDIX family hydrolase 
Protein accessionYP_001604953 
Protein GI162421114 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000116771 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGC AAAATCCAGC AGCAGTCATC GAGTGGGTTG ACATTGTTGA TGAGCAAAAT 
AACGTCATTG CTCAGTCCAG TCGTCAGCAA ATGAGAGCTC AGCGACTACG CCATCGTGCT
ACCTATATTG TGGTGCACGA TGGAATGGGG AAAATTCTGG TACAACGCCG TACTGAGAGC
AAAGATTTTC ATCCCGGCAA ACTGGATGCC ACGGCGGGGG GCGTTGTGCA AAGTGGCGAG
AACTACCTTG AATCCGCTCG GCGCGAGGCT GAAGAAGAAT TGGGGATCGC CGGTGTGCCG
TTCGCGGAAC ACGGCCAATT CTATTTTGAA GAAGAGTGCT GCCGAGTATG GGGGGCGTTA
TTCAGTTGTG TGTCTCATGG CCCCTTTGCG TTACAACCAG AGGAAATTGA TGAAGTATGC
TGGATGGTGC CAGAAGAGAT CACCGCCCGC TGTGACGAAT TTACACCTGA TTCGCTCAAA
GCATTATCAC TGTGGCTGAC GCGCAACAAC GAACAGGATT ACGGCAAAAT CACTCCCCGC
GAAGCGTAA
 
Protein sequence
MVEQNPAAVI EWVDIVDEQN NVIAQSSRQQ MRAQRLRHRA TYIVVHDGMG KILVQRRTES 
KDFHPGKLDA TAGGVVQSGE NYLESARREA EEELGIAGVP FAEHGQFYFE EECCRVWGAL
FSCVSHGPFA LQPEEIDEVC WMVPEEITAR CDEFTPDSLK ALSLWLTRNN EQDYGKITPR
EA