Gene YpAngola_A0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0341 
Symbol 
ID5798805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp356273 
End bp357376 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID641338349 
ProductLacI family sugar-binding transcriptional regulator 
Protein accessionYP_001604949 
Protein GI162420134 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000954655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTA TCGCGTTACA TTGTCGAAGC CCGTTCGAAT GGCCAGGTTT CAGCAGACAG 
GGAATCAGCA TGGAAAAAAT ACGCAAGCGC CGTAATACCG GGCGGGTCAC GCTACAGGAA
GTAGCCGATT ATGCTGGGGT AGGCTCGATG ACTGTTTCCC GAGCGCTACG AACGCCGGAA
CAGGTCTCAG ATAAGTTACG TGAGAAAATA GAGCAAGCGG TTGAAAAATT AGGCTACATT
CCAAACCGTG CCGCCGGTGC TTTAGCGTCA GGGCACAGCG ATACCGTGGC GGTGTTGATT
CCGTCTTTAA CCGATAAAGC CAGCTCTCGG TTTATGCAGG CACTACAGCA AATTCTCAAT
AAAAATGAAT TTCAGTTATT GCTGGGTTGC CATGAATACA ATCAACGTAA AGAAGCTGAG
ATTCTTATGA CGTTACTGCA AAGCCACCCG GCGGCAGTGG TGATATTTGG CTCGCAGTTG
GCGGATAAGA CATATCAGAT TCTTGAGCGC ACCAATATCC CTATCGTTAA TGTTGTCGGC
TCCTATTTTA AAGGGGCTAA AATTACCCTT GAAGCGGCTT TCTTTGAATC GGCTTATGAA
TTAACCCGTC ACTTACTGGA GCGTGGCTAT CAACATATTG GCTATCTGGG GGCGCATCGG
GATAATCAGT TGCAACGCCA GCAGCTCAAT GGATGGCATA AGTCGATGCT CGAGCATTAC
AAAAATGCTG ACCAAACGGT CACCACGCCC GATGCGGCCA GCTTACAATT TGGCCGTTAT
GCCTTGACGG AGATCTTACT GCGCCAGCCT GAATTAGATG CAGTGATATG CAGCCACGAA
GATATTGCAC TTGGTGTGCT GTTTGAATGC CAGCGGCGGC TGCTTAAAAT CCCTAGCGGC
ATTGCGGTTG CTTGCCTGGA TGGCTCAGAG AGCTGTGATC AAACTCATCC AACGCTGACC
TCAATGCGTA TCGATTATAA AAAAATGGGG AAAGAGGCCG GTAAGATGCT GATTGATATG
CTCAATGAGG ATGATGCCGG AGTGAAAAGT GTGCCCCTCA GCCAAAGTTT TAACTATAAA
TTTGAACCAC GGCAAAGTAC CTAA
 
Protein sequence
MAGIALHCRS PFEWPGFSRQ GISMEKIRKR RNTGRVTLQE VADYAGVGSM TVSRALRTPE 
QVSDKLREKI EQAVEKLGYI PNRAAGALAS GHSDTVAVLI PSLTDKASSR FMQALQQILN
KNEFQLLLGC HEYNQRKEAE ILMTLLQSHP AAVVIFGSQL ADKTYQILER TNIPIVNVVG
SYFKGAKITL EAAFFESAYE LTRHLLERGY QHIGYLGAHR DNQLQRQQLN GWHKSMLEHY
KNADQTVTTP DAASLQFGRY ALTEILLRQP ELDAVICSHE DIALGVLFEC QRRLLKIPSG
IAVACLDGSE SCDQTHPTLT SMRIDYKKMG KEAGKMLIDM LNEDDAGVKS VPLSQSFNYK
FEPRQST