| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0335 |
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| Symbol | nagD |
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| ID | 5798799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 348928 |
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| End bp | 349674 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641338343 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001604943 |
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| Protein GI | 162419319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00626353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATCA AAAGCGTTAT TTGCGATATC GATGGGGTGT TATTACATGA CAACACCGCC
ATTAAGGGCG CCAATGACTT TTTAGCCCGT ATTCAGGATG CTGGAATGCC ATTGGTGATC
CTAACCAACT ACCCATCCCA GACGGCGCAA GATCTGACTA ACCGCTTTAT CACTGCCGGG
CTTGATGTGC CGGAAAGCGC GTTTTATACC TCAGCCATGG CAACGGCCGA CTTTTTACGC
CGTCAGGATG GCAAAAAAGC CTATGTTATT GGCGAGGGTG CTTTAGTTCA CGAACTCTAT
AAAGCTGGCT TTACCATCAC CGATATCAAT CCTGATTTTG TTATTGTCGG TGAGACGCGT
TCTTATAACT GGGACATGAT GCATAAAGCA GCCTATTTTG TTGCCAATGG TGCACGTTTT
ATTGCCACTA ACCCGGACTG CCACGGCTTC GCCCCAGCCT GTGGTGCTCT GTGCGCACCT
ATTGAAAAAA TATCAGGCCG CAAACCGTTT TATGTCGGTA AGCCAAGTCC ATGGATCATC
CGTGCGGCGC TGAATAAAAT GCAGGCGCAT TCCGAAAGCA CCGTGATTGT CGGCGATAAC
TTACGTACTG ATATTTTAGC GGGCTTCCAG GCCGGTCTGG AGACGATTCT GGTCTTATCC
GGTGTCTCAA CCCTTACTGA TATCGACGCC ATGCCGTTCC GTCCAAGCTA CGTTTACCCC
TCGGTTGCCG ACATCGATAT TATCTAA
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| Protein sequence | MTIKSVICDI DGVLLHDNTA IKGANDFLAR IQDAGMPLVI LTNYPSQTAQ DLTNRFITAG
LDVPESAFYT SAMATADFLR RQDGKKAYVI GEGALVHELY KAGFTITDIN PDFVIVGETR
SYNWDMMHKA AYFVANGARF IATNPDCHGF APACGALCAP IEKISGRKPF YVGKPSPWII
RAALNKMQAH SESTVIVGDN LRTDILAGFQ AGLETILVLS GVSTLTDIDA MPFRPSYVYP
SVADIDII
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