| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0278 |
|---|
| Symbol | |
|---|
| ID | 5798742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 292157 |
|---|
| End bp | 293068 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641338289 |
|---|
| Product | LysR family substrate-binding transcriptional regulator |
|---|
| Protein accession | YP_001604895 |
|---|
| Protein GI | 162419634 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA CGTTGGAAGA GTTGCAGGCA TTTACCTCGG TAGTGGACTG CGGCTCTATC
ACGGCTGCGG CAGAGCAGCG CAGCCAAACG ACATCGGGGA TTAGCCGGGC ATTGAGTCGG
CTAGAGCAGA AGCTGGCGAC AACGTTGCTA CGCCGTACGA CTCGGCGTCT GGAGCTGACA
GAAGAGGGGG CGCTGTTCCT CAGTCATGCG CGGCAGATTA TCGGCGCAGT CGATGATGCT
GAAGAGCAAA TTGCCCTGAG GCGGTTGAAG CCTGCTGGCC GGTTACGAGT TAATGCGGCA
GCTCCTTTTA TGCAACATGT CATTGTGCCG ATGATCACCG GTTTCCGTGC GTTGTATCCG
CAAATCACGT TGGAATTGAA TACCGACGAT CTCAATATCG ATCTGCTTGA GCAGCGCACT
GACATTGCTA TCCGTATCGG TGCGTTGAGG GATTCGACGA TCCATGCCCG GCTGCTTGGT
GCCAGCCGGG TGCGTCTGCT TGCCAGCCCT AACTACCTAC AACGTCACGG TACGCCTCAC
ATCATTGAGG CACTGGCAGA TCACAGCCTG CTGGGCTTTA CTCAGCCCGA ATTTCTTAAT
CAGTGGTCAT TACCCCATTT ACCCGGCGGG CGTTCGTCAA TTATCCCCAA CTTGGCGGCT
TCCAGCGGTG AGACTCTGCG TTTACTGGCT TTACAGGGCG AAGGGATTGC CGAACTCTCT
GATTTCATGA CCCGCGAGGA TCAATTAGCT GGGCGTTTAG TCGAGGTTCT GGCTGATCAA
ATTCTAGAGA CTTGGCAACC GATCAACGCC GTTTATTACC GTAATACTCA GCTTGCTGCG
CGCATTACCT GTTTTCTTGA TTATGTTAGT GAACAGATTA AGTTACAGGG GAGTCACTGG
CTAAGAATAT AA
|
|---|
| Protein sequence | MKVTLEELQA FTSVVDCGSI TAAAEQRSQT TSGISRALSR LEQKLATTLL RRTTRRLELT
EEGALFLSHA RQIIGAVDDA EEQIALRRLK PAGRLRVNAA APFMQHVIVP MITGFRALYP
QITLELNTDD LNIDLLEQRT DIAIRIGALR DSTIHARLLG ASRVRLLASP NYLQRHGTPH
IIEALADHSL LGFTQPEFLN QWSLPHLPGG RSSIIPNLAA SSGETLRLLA LQGEGIAELS
DFMTREDQLA GRLVEVLADQ ILETWQPINA VYYRNTQLAA RITCFLDYVS EQIKLQGSHW
LRI
|
|---|
| |