| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0251 |
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| Symbol | papD |
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| ID | 5798715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 262117 |
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| End bp | 262836 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641338265 |
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| Product | fimbrial chaperone protein |
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| Protein accession | YP_001604871 |
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| Protein GI | 162419097 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0319296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0000992715 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGC TCTCATTAAT CGCGTTGACC AGCACAGTGG TATTCACCAG TTATACCGCC
AATGCTGCGA TTGCATTAGA CCGGACGCGA ATTATTTATA ACGGGCAGGA TAAGTCCATT
AGCCTGAATA TCAGTAATGA AAATAAAACA CTGCCCTATT TAGCACAGGC GTGGATTGAG
AATGAACAAC AGCAAAAAGT CACCACCCCG TTAGTGGCAA CGCCACCAGT TCAGCGAGTA
GAAGCGGGTA AGAAAAGCGC GGTGCGTATC TCTGCCACCC CTGAGGCGCT GAAATTGCCA
CAAGATCGCG AGTCACTGTT CTACTTCAAT CTGCGTGAAA TTCCGCCTCG CAGTGAAAAA
TCTAATGTCA TGCAGATTGC CTTACAAACC AAAATCAAAC TGTTCTACCG GCCAGAAGGG
ATTACCCCTG CTACGGGCCA AATCTGGCAG GAACAACTGG TTCTGCATAA AACGGCGCAA
GGTTTTCGGC TAGAGAACCC CACTCCCTAT TACATTACGG TCGTTGGGCT GGCGGAGAAA
GGTAAGTCAT CGGCTGACAG CAATTTTCAA CCTTTGATGG TTGCGCCCAA ATCCAGTGCT
GAGCTGAAAT CTGCCAGTTT CACCGCCCCC GTCCTGACCT ACATTAACGA TTATGGTGGC
CGACCAGAAC TGAGTTTCAG TTGCAGCGGC AGTACTTGCC GGGCAGCTAA AGCGATTTAA
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| Protein sequence | MKKLSLIALT STVVFTSYTA NAAIALDRTR IIYNGQDKSI SLNISNENKT LPYLAQAWIE
NEQQQKVTTP LVATPPVQRV EAGKKSAVRI SATPEALKLP QDRESLFYFN LREIPPRSEK
SNVMQIALQT KIKLFYRPEG ITPATGQIWQ EQLVLHKTAQ GFRLENPTPY YITVVGLAEK
GKSSADSNFQ PLMVAPKSSA ELKSASFTAP VLTYINDYGG RPELSFSCSG STCRAAKAI
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