Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0241 |
Symbol | fliR2 |
ID | 5798705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 253003 |
End bp | 253782 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641338257 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001604863 |
Protein GI | 162419491 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.306618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0171126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGG GAATCGATAT TCATGCCATG ACGGCTCCGC TATTCGCACT CTGGCTACCT TTTGTCAGGA TTTTGTCGTT TTTGCATTTT TGTCCGGTTA TTCGGCATAA AGCCTTTACC CGCAAAGCCA AGATTGGCAC CGCGCTGTTA CTGGCCATTT TGATAACCCC AATGATCAGC CAACCGGTGG TATCCGGGGA GTTGCTCTCG ATAGAAAACC TCTTATTGGC CGGTGAACAA ATTCTGTGGG GCTGGTTATT TGGCTCCATG TTGCATTTGG TACTAGCCGC ATTAGAGGCC GCGGGTCAGA TTCTATCGAT GAATATGGGC CTGGGTATGG CAATGATGAA TGACCCCACC AGCGGAGCAT CGACGGCGGT TATCTCACAA ATAATCTTTA CTTTCAGTGT GTTGATTTTT TTTACCCTTA ATGGCCACTT ACTGTTTGTC ACCATTTTGT TGAAAAGTTT CAGTAGCTGG CCTATCGGCG AAGCCATCAA TGATTTTTCA CTACGTTCAT TGGCACTGAG CCTTGGCTGG ATCCTTTCAT CGGCCACGCT GTTAGCACTG CCTACCACTT TTATCATGCT GATCGTGCAA GGGTCTTTCG GGTTACTGAA CCGTATCTCC CCCACGTTAA ACCTGTTTTC ACTCGGTTTC CCTATCGGCA TGTTGTTTGG CCTGCTGTGC CTGCTGCTGT TAGCGATCAA TATCCCTGAT CATTATCTTC ATCTGACCAA TGAGATCCTG ACACAGTTTG AACGGATGAA GGTGCACTGA
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Protein sequence | MPMGIDIHAM TAPLFALWLP FVRILSFLHF CPVIRHKAFT RKAKIGTALL LAILITPMIS QPVVSGELLS IENLLLAGEQ ILWGWLFGSM LHLVLAALEA AGQILSMNMG LGMAMMNDPT SGASTAVISQ IIFTFSVLIF FTLNGHLLFV TILLKSFSSW PIGEAINDFS LRSLALSLGW ILSSATLLAL PTTFIMLIVQ GSFGLLNRIS PTLNLFSLGF PIGMLFGLLC LLLLAINIPD HYLHLTNEIL TQFERMKVH
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