Gene YpAngola_A0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0197 
Symbol 
ID5798661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp211311 
End bp211826 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content48% 
IMG OID641338215 
ProductIS3 family transposase 
Protein accessionYP_001604821 
Protein GI162421460 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0187558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC CTTTTTCAAC CCGCCTAGCG GCGGTTCAAC ATTACCTTTC AGGAAAGGCC 
ACTCTGCGGG AAACCGCACG TCAATTCAGT GTTGGCAAAT CCCCTCTTAC GCGTTGGATC
CGAGCTTTTC GCCGTCAAGG TGAGGCTGGA CTGGAGCACC ATCTTTCCAG AACTTATACT
CCAGAATTCA GGCTTTGCGT TGTCCGCTAT ATGATGGCAA ACAGATGTAG CGCTGCCGAT
GCTTCTGCTC ATTTTAACAT TCCCAACGAG ACGATTATCC AAAACTGGAT GAAACGTTAT
CGAGAGGGAG GAAAAGAAGC GCTTAACCCA TCGAAAACGG GTCCTACTAT GCCAAAAGAT
AAATATGAGC ACGATTCAAA ACCGTTCAGC GAGATGACGC ATGCGGAGCT AGAGAAAGAA
CTTGAGTATC TGCGCGCGGA AAACGCTTAT CTAAAAAAGC GGAAAGCCCT GAGAGAAGAA
AAGGCACTCA GGGAGCAGCA GAAAAAACCA GAATAG
 
Protein sequence
MKHPFSTRLA AVQHYLSGKA TLRETARQFS VGKSPLTRWI RAFRRQGEAG LEHHLSRTYT 
PEFRLCVVRY MMANRCSAAD ASAHFNIPNE TIIQNWMKRY REGGKEALNP SKTGPTMPKD
KYEHDSKPFS EMTHAELEKE LEYLRAENAY LKKRKALREE KALREQQKKP E