| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0196 |
|---|
| Symbol | |
|---|
| ID | 5798660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 210472 |
|---|
| End bp | 211257 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641338214 |
|---|
| Product | integrase core subunit |
|---|
| Protein accession | YP_001604820 |
|---|
| Protein GI | 162421050 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0350068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCACGCA GTACATACTA TTATCATGCA TCGAAACCGG ACGGTGTAAT TGATGACTAT
GCAGATGCGG TAAAAGCGAT TGGCGCCCTA AGCAGACGAC ACGCACAGCG CTACGGTTAT
CGCCGGATGA CGGTCGCACT GAGAAAAGAA GGGTTCACAC TGAATCACAA AACGGTGCGA
AAACTGATGA ATCAGCACGG GTTACTCAGC CTCATTCGGC GGAAAAAATA TCGCTCCTAT
AGGGCCGATG GTGGCCGGGC ATCCGATAAT CTATTGGCTC GTAATTTTAC ATCCGAAATC
AGTGGATTGA AGTGGTGTAC AGATGTCACA GAGTTCCGAG TTGGAGCACA GAAGCTGTAT
TTGTCGGTGA TACAAGACCT GTTTAATAAT GAGATTATTT CTTGGCATAT GTCAGAAAGA
GCAGCATTAA TCCTGACGTG CAAGACGCTG GAAAAAGCGC TGAAAGTGAA AGGGAGAAAA
GAAGGCCTGA TGTTGCACAG CGATCAGGGC TGGCATTACC GAACGCCGAT GTGGCGCTCA
ATGCTTGTCG AGGCGGGGAT AAGGCAAAGT ATGTCACGCA AAGGCAATTG TTTAGATAAT
GCAGTGATGG AAAATTTCTT CAGTCACCTG AAAGCCGAGA TGTATCACCG TAAGAAGTAC
GATTCAGCCA CAGTTTTAAA GCGTGACATT GTAGAATATA TCCATTATTA CAATACAGAG
CGCATTAGCC TGAAAACAGG CGGAATGAGT CCGGCAGAAT ACCGGACTCA GGTAGAAAAG
CAGTAA
|
|---|
| Protein sequence | MARSTYYYHA SKPDGVIDDY ADAVKAIGAL SRRHAQRYGY RRMTVALRKE GFTLNHKTVR
KLMNQHGLLS LIRRKKYRSY RADGGRASDN LLARNFTSEI SGLKWCTDVT EFRVGAQKLY
LSVIQDLFNN EIISWHMSER AALILTCKTL EKALKVKGRK EGLMLHSDQG WHYRTPMWRS
MLVEAGIRQS MSRKGNCLDN AVMENFFSHL KAEMYHRKKY DSATVLKRDI VEYIHYYNTE
RISLKTGGMS PAEYRTQVEK Q
|
|---|
| |