Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0194 |
Symbol | |
ID | 5798658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 206361 |
End bp | 208541 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641338212 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001604818 |
Protein GI | 162419214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0233266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA AACACCTCTG GGTATTAAAT CCGTGTCTGC TGGTCATGCT CACACCAGCG GCGTGGGCAG AGGATCAACT TGTGGTTTCA GCCAACCGCT CACACCGCAG CGTGGCAGAA ATGGCGCAAA CAACTTGGGT GATTGAAGGC CAGGAACTTG AACAACAAGT TCAAGGCGGC CTGGAAATCA AAGACATCTT GGCTCAATTG ATCCCAGGTA TCGACGTCAG CAGCCAAGGC CGTACCAACT ACGGCATGAA CATGCGTGGC CGCTCAATCA TGGTGATGAT CGACGGCGTG CGGCTGAACT CTTCACGTAG CGACAGCCGC CAACTCGATT CGATCGATCC GTTTAATATT GCACACATTG AAGTCATCTC CGGTGCGACG TCACTTTATG GCGGGGGTAG CACGGGGGGC TTGATCAATA TCGTGACCAA AAAAGGCCAG GAAGGAAAAC AGGTTGAGTT GCAAATTGGC GGCAAAACCG GCTTTAACAG CCATAACGAC CACGATGAGA ACATCTCGGC CGCCATGAGT GGGGGGACTG AGCGCGCATT CGGCCGATTC TCTGTTTCTT ATCAACGTTA TGGGGGGGGG TACGACGGCA AAGGCAATGA GGTTTTGATC GACAACACCC AGACCGGCTT GCAATATTCT AACCGTCTGG ACGTGATGGG CACGGGAACC CTCAATATCG ACGAAAACCA GCAATTGCAG CTAACCACTC AGTATTTCAA CAGCGAATCC GATGGCAAAC ACGGCTTGTA TCTGGGGCAA AACTTCTCAG CAGTAACGGG TACCGGGCAG GCCTCCAACA GCGCAGCGCT AAATTCAGAC CGTATTCCGG GTACCGAACG CCATCTCATC AACTTGCAAT ACTCCAACAC GGATTTCTGG GGGCAGGATT TAGTGGCGCA AGTGTATTAC CGTGATGAAT CACTAACCTT TTACCCATTC CCAACACTGA AAGATGGCAA GGTGAGCACT ATCGGTGCAT CACAGCAAAA AACCGATTTC TACGGCAGTA AACTGACATT GAACAGTGAA CCTATCGATA GCCTAACACT GACTTACGGT ATCGATTTGG AACATGAAAG TTTCAATGCC AATCAACAGT TCTTTAATCT GGCGAAGGCA CAGCAATCCG GCGGCATGAC GTTAGAAAAT GCCTACAACG TTGGCCGTTA CCCAAGTTAT ACCACCACCA ACCTGGCTCC CTTCTTACAA ACCCGCTATG ACATCAACCC GATTTTCACT CTGAGCGGCG GTGTGCGTTA CCAGTACACA GAGAACAAGG TTGATGATTT TGTGGGTTAC GCACAACAAC AAGCGATTGC CAGCGGCTCC GCGACTTCCG CTGATCCCGT ACCTGGTGGG AAAACGGATT ACAACAACTT CCTGTTCAAT GCCGGTTTAC TGGCGCACCT GACAGAAAGC CAGCAGACCT GGTTCAACTT TTCACAAGGA TTTGAGATCC CGGATCTGGC GAAATATTAC GGTTCTGGCT CCTACACGCT GGTTAACGGT CACTATCAGT TGCAAAACAG TGTCAACGTG AATGACTCCA AACTGGAGGG CATCAAGGTT GATTCCTATG AGCTGGGCTG GCGCTATACC GGCGATAACC TGCGCACCCA AATGGCGGGT TATTACTCGC TTTCTGATCA GACTATCTCG ATCAACAAAA CAGACATGAC CATCAATGTG TTACCGGATA AGCGCCGAAT CTATGGGGTA GAAGGCGCAG TAGATTACTT CTTCGATAAC AGCGAATGGA GTGCCGGTGC AACATTTAAC CTAATTAAGT CGGAAACTAA GGTTAGCGGT AAGTGGCAGA AACTGACTAT CGATGCTGCC AGCCCGTCGA AAGCCACCGC CTACATTGGC TGGGCACCGG GTGATTGGAA TCTGCGCGTG CAATCCCAAC AAACGTTCGA TGTTTCCGAT AGCAAGGGTG ACAAAATAGA CGGTTACAAC ACCATCGATT TTCTCAGTAG TTACGCCCTA CCCGTGGGAA AACTCAGTTT CAGTATCGAA AACTTGCTGG ACAAAGAGTA CACCACCGTT TGGGGTCAGC GCGCACCGAT TCTGTATAGC CCAACCTACG GCTCACCCAA CTTATACAGC TATAAGGGCC GTGGCCGGAC TTTTGGTGTG AACTACTCAG TGTTGTTCTG A
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Protein sequence | MKHKHLWVLN PCLLVMLTPA AWAEDQLVVS ANRSHRSVAE MAQTTWVIEG QELEQQVQGG LEIKDILAQL IPGIDVSSQG RTNYGMNMRG RSIMVMIDGV RLNSSRSDSR QLDSIDPFNI AHIEVISGAT SLYGGGSTGG LINIVTKKGQ EGKQVELQIG GKTGFNSHND HDENISAAMS GGTERAFGRF SVSYQRYGGG YDGKGNEVLI DNTQTGLQYS NRLDVMGTGT LNIDENQQLQ LTTQYFNSES DGKHGLYLGQ NFSAVTGTGQ ASNSAALNSD RIPGTERHLI NLQYSNTDFW GQDLVAQVYY RDESLTFYPF PTLKDGKVST IGASQQKTDF YGSKLTLNSE PIDSLTLTYG IDLEHESFNA NQQFFNLAKA QQSGGMTLEN AYNVGRYPSY TTTNLAPFLQ TRYDINPIFT LSGGVRYQYT ENKVDDFVGY AQQQAIASGS ATSADPVPGG KTDYNNFLFN AGLLAHLTES QQTWFNFSQG FEIPDLAKYY GSGSYTLVNG HYQLQNSVNV NDSKLEGIKV DSYELGWRYT GDNLRTQMAG YYSLSDQTIS INKTDMTINV LPDKRRIYGV EGAVDYFFDN SEWSAGATFN LIKSETKVSG KWQKLTIDAA SPSKATAYIG WAPGDWNLRV QSQQTFDVSD SKGDKIDGYN TIDFLSSYAL PVGKLSFSIE NLLDKEYTTV WGQRAPILYS PTYGSPNLYS YKGRGRTFGV NYSVLF
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