| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0192 |
|---|
| Symbol | iucC |
|---|
| ID | 5798656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 203215 |
|---|
| End bp | 204963 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641338211 |
|---|
| Product | aerobactin siderophore biosynthesis protein IucC |
|---|
| Protein accession | YP_001604817 |
|---|
| Protein GI | 162418645 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.000752976 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA CCGATTACGC TAACTGGCAG CAGGTTAATC GCCACATGAT CGCTAAAATC
CTTAGCGAAC TGGAATATGA ACGCACTCTG CATGCTGAAT TACACGGTGA AACAGGGCGC
ATCACCTTGC CCGGCGCGGT TTACACCTTT AACGGCAAGC GGGGTATCTG GGGTTGGCTA
CATATTGATC CTGCCACGCT GCGCTGTGAG GGTGTGCCGC TCGCCGCTGA CCACATGCTG
CGCCAACTGG CGCTCGTGCT GAAGATGGAC GATTCGCAGG TCGCAGAGCA CCTTGAAGAT
TTGTACGCCA CACTGCGTGG AGACATGCAA TTACTCTCCG CTCGCCACGG TATGAGTGCG
GAAGCGTTGA TCGCCCTTAA TGATGATGCC CTGCAATGCC TGCTGGCCGG TCACCCGAAA
TTTATCTTCA ACAAAGGCCG CCGCGGCTGG GGCTTAACCG CCCTGCAACA CTATGCGCCC
GAATATCAGG GCCAATTTCG TCTGCATTGG GTCGCAGCCA AACGCGGCAG CTTTATCTGG
TGCGTGGATG CCGAATACCC GTTGGACAAC TTGCTCAACA GCGCCATGGA CCCCGCCGAA
CGCCAACGCT TTGATCGCCG CTGGCGTGAG TGCCAATTGA ATGATGATTG GGTCCCGGTG
CCTTTACATC CGTGGCAATG GCAGCAAAAA ATTGCCTTGC ACTTCCTACC ACAACTTGCC
GAGGGTGAAC TGATCGAACT GGGTGAATTT GGCGATCACT ATCTGGCGCA ACAATCGTTA
CGCACATTAA CCAATGTCAG CCGCCGTGTG CCATTTGATA TCAAACTGCC ACTCACCATT
TACAACACCT CTTGTTATCG TGGCATCCCA GGCAAATACA TCAGCGCAGG CCCCGCGGCT
TCGCGCTGGT TGCAGCAAGT CTTCGCACAA GACCGCACAC TGCATGAAAG CGGGGCTGAG
ATCCTCGGTG AACCCGCCGC AGGTTATATG CTGCACCAGA CCTACGCCAC ACTTGCCAAG
GCGCCTTATC GCTGCCAGGA AATGCTCGGT GTGATTTGGC GAGAGAATCC GTCCTGCTAT
TTGCGAGAGG GTGAACATGC CATTTTGATG GCGACGCTGA TGGAAACCAA CAATCAGGGT
CATCCGCTGA TCGCGGCCTA TATTGCACGT TCGGGGTTAA GTGCTGAAGC CTGGCTGGAG
CAGATGTTCC GTGTGGTAGT GGTGCCGATG TACCACCTGA TGTGTTGCTA CGGCGTGGCG
CTAATTGCCC ACGGCCAGAA CATCACTCTG GTAATGAAAG ACCATGCCCC CCAGCGCATC
CTATTGAAAG ATTTCCAGGG CGATATGCGT CTGGTCGATA AAGATTTTCC ACAAGCGGCC
TCGCTGCCTA ACGTGGTTAA AGACGTGACT GTGCGCTTAT CTGCCGACTA CCTCATCCAC
GATCTGCAAA CCGGCCATTT TGTCACCGTA TTACGCTTTA TTTCACCGTT GATGCAGGCT
TGCAACCTGA GCGAATACCG CTTCTATCAA CTGCTGGCAC AGGTGCTGGA GCGCTACATG
GCGCAGCATC CAGATTTGGC AGACCGCTTT ACCTTATTCA ATTTATTTAA ACCACAGATT
ATCCGTGTGG TCCTCAACCC AGTAAAACTC ACCTACTCAG AGCAGGACGG CGGCAGCCGC
ATGTTGCCTG ATTATTTGCA GGATCTGGAT AACCCCCTTT ATTTGGTCAC CAAGGAGCTA
GCCCAATGA
|
|---|
| Protein sequence | MITTDYANWQ QVNRHMIAKI LSELEYERTL HAELHGETGR ITLPGAVYTF NGKRGIWGWL
HIDPATLRCE GVPLAADHML RQLALVLKMD DSQVAEHLED LYATLRGDMQ LLSARHGMSA
EALIALNDDA LQCLLAGHPK FIFNKGRRGW GLTALQHYAP EYQGQFRLHW VAAKRGSFIW
CVDAEYPLDN LLNSAMDPAE RQRFDRRWRE CQLNDDWVPV PLHPWQWQQK IALHFLPQLA
EGELIELGEF GDHYLAQQSL RTLTNVSRRV PFDIKLPLTI YNTSCYRGIP GKYISAGPAA
SRWLQQVFAQ DRTLHESGAE ILGEPAAGYM LHQTYATLAK APYRCQEMLG VIWRENPSCY
LREGEHAILM ATLMETNNQG HPLIAAYIAR SGLSAEAWLE QMFRVVVVPM YHLMCCYGVA
LIAHGQNITL VMKDHAPQRI LLKDFQGDMR LVDKDFPQAA SLPNVVKDVT VRLSADYLIH
DLQTGHFVTV LRFISPLMQA CNLSEYRFYQ LLAQVLERYM AQHPDLADRF TLFNLFKPQI
IRVVLNPVKL TYSEQDGGSR MLPDYLQDLD NPLYLVTKEL AQ
|
|---|
| |