Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0187 |
Symbol | |
ID | 5798651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 198027 |
End bp | 198860 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641338208 |
Product | hypothetical protein |
Protein accession | YP_001604814 |
Protein GI | 162418931 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00856526 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000433457 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAACA AAATAATGCC AAAAGTTAAT CGCGAGGGGC GCAGATCATT CTTACAAAAA TCGATTGCTG TCGTTGCTAC CGGTGTAGTG ACCCATGCAT TCTCTGCGCC GAACATTACA TTAGAGAAAG ATACCAAACC TCAACCTGGA ACATGTATTT TATCTGTTGA ACAAATGGCT GGCCCATATA TTAAAAGTAA TATGCCAATA AGAAGGAACA TAGCAGAAAA TGAAAACGGG GTGCCTTTAC TCCTTAAAAT AACAGTTATC GATTCAAATT CATGCCGCCC ATTAGAATAT TATTACGTTG ATATATGGCA ATGTAATGCT CGGGGGCGTT ATTCGGGATG GAGTTATGTT GACCCTGATA AAGACGCACC AAGTGGAGAA GTTGCGAGTA TCAACAGAAC TGATGAGAAA AGTTTTTTAA GGGGCTCACA GGTAACTGAT AGTCATGGGC TCGTCAGGTT TACCAGTATC TACCCTGGGT TTTATGCCGG GCGTGCTGTT CATATTCATT TTGCCATTAA GCCACCAAAA GCATCTCCTC AGGAGGTCGA TAAATACTCA TTTATTAGTC AGCTTTACTT CCCAGAAGAG TTCAATAGCG AAATAGAACA ACGGGCTGAA TATTCGCTTA GAAAAATCAA AAGGTTAATA AATAGTGATG ATGAAATATT TAACGAAGCA AATGGTGAAA ATGCAGTCCT TGCCGTGAGT AAAATCAATG AAAATGACAT TAATGATGGT GTTTTGGCGG AAATAACGAT AGCAATAAAT AAAGATATCT TGTCTAAAAG AATTGACCCT AAGGATATTT TAAAGATCAC ATAG
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Protein sequence | MTNKIMPKVN REGRRSFLQK SIAVVATGVV THAFSAPNIT LEKDTKPQPG TCILSVEQMA GPYIKSNMPI RRNIAENENG VPLLLKITVI DSNSCRPLEY YYVDIWQCNA RGRYSGWSYV DPDKDAPSGE VASINRTDEK SFLRGSQVTD SHGLVRFTSI YPGFYAGRAV HIHFAIKPPK ASPQEVDKYS FISQLYFPEE FNSEIEQRAE YSLRKIKRLI NSDDEIFNEA NGENAVLAVS KINENDINDG VLAEITIAIN KDILSKRIDP KDILKIT
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