Gene YpAngola_A0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0182 
Symbol 
ID5798647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp193682 
End bp194425 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID641338204 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001604810 
Protein GI162421668 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00268604 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000585836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTCTG TTTTCAATAG GAGTAACGAG GTAATAGAAA CACTGCGTGA TTATATCGAC 
AGAAAACTTA CCATCTACGA CAGTCCAAAA TATACCTATA TGGTGATCAA TAAAAAGAAT
CCAGGCGATA TTTTCATTGT CACTAGCTAC CCAAATGAAT GGGCTGAACT CTATACAAAT
AATAACTACC AGAATATAGA TCCTGTTGTC CTGATCGCTT TCAGGCGGTT CTCTCCGTTC
TCTTGGGATG AAAATATTAC TGTCCTTTCT GAACTGAAAT TATCAAAAAT CTTCACTCTC
TCTAAGAAAT ATAACATTGT TAATGGTTTC ACTTTTGTTC TGCACGATAC GATGAATAAT
TTGGCAATGT TGTCACTCAT TATGGATGAT AGCGCTCTGA ATGGAGTAGA AAGTAGAGTG
TTGAATGATA GGGACAGGCT ACAAATGCTC CTGATAGAAA CCCATGAAAA GATGCTTACA
TTGAGTCAAA GAAATATGAA TATCCAGGAA CGCCAGGGGA AAGGTATGCC CGGTAAAGCC
ATTCTATCCC CGCGAGAAAA TGAAGTGCTC TACTGGGCCA GCATGGGAAA AACCTATCAA
GAGATTGCCA TAATCACAAA TATCACCCCC AGAACAGTAA AATATCACAT AGGAAATGTG
GTAAAAAAGT TGGGTGTAAT TAACGCAAAA CAGGCAATCG GGCTTGGTGT TGAACTGGAA
ATTATTAAGC CGATTCTGGC ATAA
 
Protein sequence
MHSVFNRSNE VIETLRDYID RKLTIYDSPK YTYMVINKKN PGDIFIVTSY PNEWAELYTN 
NNYQNIDPVV LIAFRRFSPF SWDENITVLS ELKLSKIFTL SKKYNIVNGF TFVLHDTMNN
LAMLSLIMDD SALNGVESRV LNDRDRLQML LIETHEKMLT LSQRNMNIQE RQGKGMPGKA
ILSPRENEVL YWASMGKTYQ EIAIITNITP RTVKYHIGNV VKKLGVINAK QAIGLGVELE
IIKPILA