Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0182 |
Symbol | |
ID | 5798647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 193682 |
End bp | 194425 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641338204 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001604810 |
Protein GI | 162421668 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00268604 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00000585836 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATTCTG TTTTCAATAG GAGTAACGAG GTAATAGAAA CACTGCGTGA TTATATCGAC AGAAAACTTA CCATCTACGA CAGTCCAAAA TATACCTATA TGGTGATCAA TAAAAAGAAT CCAGGCGATA TTTTCATTGT CACTAGCTAC CCAAATGAAT GGGCTGAACT CTATACAAAT AATAACTACC AGAATATAGA TCCTGTTGTC CTGATCGCTT TCAGGCGGTT CTCTCCGTTC TCTTGGGATG AAAATATTAC TGTCCTTTCT GAACTGAAAT TATCAAAAAT CTTCACTCTC TCTAAGAAAT ATAACATTGT TAATGGTTTC ACTTTTGTTC TGCACGATAC GATGAATAAT TTGGCAATGT TGTCACTCAT TATGGATGAT AGCGCTCTGA ATGGAGTAGA AAGTAGAGTG TTGAATGATA GGGACAGGCT ACAAATGCTC CTGATAGAAA CCCATGAAAA GATGCTTACA TTGAGTCAAA GAAATATGAA TATCCAGGAA CGCCAGGGGA AAGGTATGCC CGGTAAAGCC ATTCTATCCC CGCGAGAAAA TGAAGTGCTC TACTGGGCCA GCATGGGAAA AACCTATCAA GAGATTGCCA TAATCACAAA TATCACCCCC AGAACAGTAA AATATCACAT AGGAAATGTG GTAAAAAAGT TGGGTGTAAT TAACGCAAAA CAGGCAATCG GGCTTGGTGT TGAACTGGAA ATTATTAAGC CGATTCTGGC ATAA
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Protein sequence | MHSVFNRSNE VIETLRDYID RKLTIYDSPK YTYMVINKKN PGDIFIVTSY PNEWAELYTN NNYQNIDPVV LIAFRRFSPF SWDENITVLS ELKLSKIFTL SKKYNIVNGF TFVLHDTMNN LAMLSLIMDD SALNGVESRV LNDRDRLQML LIETHEKMLT LSQRNMNIQE RQGKGMPGKA ILSPRENEVL YWASMGKTYQ EIAIITNITP RTVKYHIGNV VKKLGVINAK QAIGLGVELE IIKPILA
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