| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0122 |
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| Symbol | trmA |
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| ID | 5798587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 123562 |
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| End bp | 124665 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641338146 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001604758 |
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| Protein GI | 162420223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00679398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.233317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCCCA ACATCCTGCC GATTGAAAGC TACGACCACC AACTGGCAGA AAAGTCTGCC
CGTCTTAAGG CGATGATGTT GCCATTTCAG GCACCCGAGC CAGAAATATT TCGTTCTCCG
GCAGACCATT ACCGTATGAG AGCCGAATTT CGCGTTTGGC ATGATGAAGA TGACTTGTAC
CACATCATGT TTGACCAACA GACCAAGCAA CGTATCCGGG TTGAACAATT CCCGGTAGCC
AGTCGGTTAA TCAATCGCTT AATGGATGCT CTGATGACCG CCATCAGAGC GGAGCCGCTA
TTGCGACGCA AACTGTTCCA AATAGATTAT TTATCTACCC TCAGCGGTAA GCTGATCGCC
TCGTTGCTGT ATCACCGCCA ATTAGATGAA GAGTGGCAGC AAAAAGCGCT GGAACTGCGA
GATCAGTTAC GTGCACAAGG TTTTGACCTA CAACTCATTG GTCGAGCAGC TAAAACTAAA
ATCATGCTGG ATCACGATTA TATCGATGAG GTCTTGCCAG TCGCCGGACG CGAGATGATC
TATCGGCAGG TTGAAAATAG TTTTACCCAA CCTAATGCGG CGGTGAATAT TCACATGTTG
GAATGGGCGC TGGATGTTAC CCAAGGTGCC ACTGGCGATT TACTGGAGTT GTATTGTGGT
AACGGTAATT TCTCATTGGC ACTGGCGCGA AATTTTGAAC GGGTGCTGGC AACAGAAATT
GCCAAACCTT CCGTCGCAGC GGCTCAATAT AATATTGCAG CAAATAATAT CGATAACGTG
CAGATTATCC GGATGTCAGC GGAAGAGTTT ACTCAGGCGA TGCAGGGCGT TCGTGAGTTT
AACCGCCTGA AGGGTATTGA TTTGGGCAGT TATAATTGCG AGACCATCTT TGTCGATCCG
CCACGCAGTG GGCTGGATCA CGAGACGGTT AAGCTAGTAC AGGCTTACCC GCGTATTCTT
TATATCTCCT GTAATCCAGA GACGCTGTGC GCCAATTTGG AACAATTACA GCACACACAT
AAAATTAGCC GACTAGCACT GTTCGATCAA TTCCCTTATA CCCACCATAT GGAATGTGGG
GTACTGCTGG AAAAACGTCA CTGA
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| Protein sequence | MTPNILPIES YDHQLAEKSA RLKAMMLPFQ APEPEIFRSP ADHYRMRAEF RVWHDEDDLY
HIMFDQQTKQ RIRVEQFPVA SRLINRLMDA LMTAIRAEPL LRRKLFQIDY LSTLSGKLIA
SLLYHRQLDE EWQQKALELR DQLRAQGFDL QLIGRAAKTK IMLDHDYIDE VLPVAGREMI
YRQVENSFTQ PNAAVNIHML EWALDVTQGA TGDLLELYCG NGNFSLALAR NFERVLATEI
AKPSVAAAQY NIAANNIDNV QIIRMSAEEF TQAMQGVREF NRLKGIDLGS YNCETIFVDP
PRSGLDHETV KLVQAYPRIL YISCNPETLC ANLEQLQHTH KISRLALFDQ FPYTHHMECG
VLLEKRH
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