Gene YpAngola_A0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0113 
SymbolhslV 
ID5798578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp115972 
End bp116496 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID641338137 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001604749 
Protein GI162418923 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAA TTGTAAGTGT ACGCCGTGAT GGTCATGTCG TTATTGGTGG CGATGGCCAA 
GTCACTTTGG GCAATACCGT GATGAAAGGT AATGCCAAAA AAGTCCGCCG TCTTTATAAC
AACAAGGTTA TTGCTGGCTT TGCGGGGGGG ACTGCTGATG CCTTTACTCT GTTCGAGTTA
TTTGAACGCA AGCTGGAAAT GCATCAAGGC CACCTGACGA AAGCGGCTGT TGAACTAGCC
AAAGACTGGC GCACCGACCG TATGCTGCGC AAGCTTGAAG CGTTACTGGC GGTTGCCGAT
GAGACCGCTT CGCTGATCAT TACTGGTAAC GGTGACGTGG TTCAACCTGA AGATGATCTG
ATTGCCATTG GCTCCGGTGG GCCTTATGCC CAATCGGCAG CACGTGCGTT GTTAGAAAAT
ACTGAATTAG GTGCGCGGGA TATCGTTGAG AAATCACTGA GTATTGCGGG GGATATTTGT
ATCTACACCA ACCGCTTCCA AACCATTGAA GAATTAACAT ACTAA
 
Protein sequence
MTTIVSVRRD GHVVIGGDGQ VTLGNTVMKG NAKKVRRLYN NKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLTKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPEDDL
IAIGSGGPYA QSAARALLEN TELGARDIVE KSLSIAGDIC IYTNRFQTIE ELTY