Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0105 |
Symbol | |
ID | 5798570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 107608 |
End bp | 109722 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641338129 |
Product | bacteriocin ABC transporter ATP-binding/permease |
Protein accession | YP_001604741 |
Protein GI | 162419349 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATA CGCATTTTAA CGAGATAAAA AACCGTCTGA ATTTTAGCTT TCGTCGTAAA GTCCCACAGG TGCTTCAAAC CGAAGCAGCA GAATGCGGAC TTGCCTGTCT GGTAATGACA TGCCGCTACC ATGGGATGGA TATAGATTTA TTTAATTTAC GCCAACGTTT TGGTATTTCT TCTCATGGCG CAACATTAGC GCTGTTAATT AATATCTCAG CACAACTTAA GTTTAAAACC CGTGCTTTAT CACTGGATTT AGATGAGTTA CGCCAATTAA AAACACCCTG TATATTGCAT TGGGATATGA GCCATTTTGT CGTCCTTGTT GCAGTGAAGG GCACCCGGTT TATTATTCAC GACCCGGCAT TTGGCCGGCG TACTGTCAGC CTAAGTGAGA TGTCACAGCA TTTTACCGGT GTCGCACTGG AATTATGGCC TAACAGTGAA TTTACCCGCC AAAAAAGCCG TACCCGTTTA AGCCTATTAT CACTGATGCG TAATATCAGC GGCTTACCTG GCTTTCTGAC AAAAATATTT TGCTTATCGT TAATGGTCGA GGCCATTAAC CTACTGCTAC CGGTAGGAAC TCAGTTGGTC ATGGACCATG TGATCATTGC CGAGGACCAT GACCTATTAG CATTGATTTG TATCGGCCTG CTTTTCTTTA TTCTGTTCCG CACGTTTTTA AGTATGTTGC GATCGTGGAC ATCGCTGGTT ATGGGGTCTT TAGTTGATGT GCAATGGAAG GCGGGTTTAT TTGATCATCT ACTCAAATTA CCTTTGGCTT ATTTTGAAAA ACGTAAACTG GGCGATATTC AGTCACGGTT TGGCTCCCTC GATATCATAC GTTCAACATT AACCAACAAT GTGGTCAACG GCATCATTGA CGGTCTAATG TCTATTGGCG TGTTTATCAT GATGTTTTTG TATGGTGGCT GGCTGGTTTG GGTGGTACTT GGTTTTACCG CCATGTACAT GATCCTGCGC CTTGCCACTT ATAATCAATA CCGTCAGGCT TCCGAAGAGC AAATTGTAAA AAATGCCAAA GCCAGCTCTC ATTTTATGGA AACACTTTAT GGCATCAGTA CGCTTAAGGC CCTGGGGCTG GCAGCAACAC GCTCACAATT TTGGCTCAAT CTAAACATAG ACACGACCAA TGCCAATATC CGACTGACTA AGTTAGATAT GTTTTTTGGC GGCGTAAACA CACTGATCGG CACCATCGAT CAAGTTGTCA TCTTATGGCT AGGCGCGTCG ATGGTGATTG ATGGGCAAAT GACATTAGGT ATGTTTGTTG CCTTTAATGC TTATCGGGGA CAATTTTCTG ATCGGGCAAC CAACTTGATC AATATGGTGT TGCAACTCCG TATGCTTGCC TTGCACAGTG AGCGTATTGC CGACATTGTT TTCACCGAAA CCGAAAAAGA ACAGACCCCC AGACAACTGC TTTCACCCAA TCAACCTGCG GTCTTTGAAG CTCGAAACAT TGCTTTTCAA TATGACAATC TGTCAAAACC TATTTTTTCT GATTTGAACA TTCACGTTGA AGCGGGTGAG AGTGTGGCGA TTACTGGCCC ATCGGGTATA GGAAAAACCA CGTTGATGAA AGTGATAGCC GGGCTGCTGA CACCTTCACA GGGGCATATT CTGATTGATG GGCTGGATAT AACGACGGTC GGCCTGAATA ATTATCGTGA TTGCATTGCC TGCGTGCTCC AGGATGACAA GCTGTTCGCA GGTTCCATCG CTGACAACAT TGCCAGTTTT GATGTCAACA AAGATGAGCA GCGTATTCTT TCCTGTGCTA ATCATTGCAA TATACATAAA GAAATTATGC ATATGCCGAT GGGTTATGAA ACGTTGATTA GTGAGCTTGG AGGCAGTTTA TCGGGCGGGC AGAAGCAACG TTTATTGATT GCCAGAGCGT TGTATCGTCA ACCTAGTTTA CTGTTTCTGG ACGAGGCAAC AAGTCATCTG GACTTAGCAA ACGAAGCACA TATCAATAAT GCGATAGCCT CACTGAAGAT CACCCGTATT TTTATCGCCC ATCGTCCTTC AACGATAGCC AGTGCCCAGC GTATTATTAA TCTGGAAAAA CAAAACGTAT CGTAA
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Protein sequence | MNDTHFNEIK NRLNFSFRRK VPQVLQTEAA ECGLACLVMT CRYHGMDIDL FNLRQRFGIS SHGATLALLI NISAQLKFKT RALSLDLDEL RQLKTPCILH WDMSHFVVLV AVKGTRFIIH DPAFGRRTVS LSEMSQHFTG VALELWPNSE FTRQKSRTRL SLLSLMRNIS GLPGFLTKIF CLSLMVEAIN LLLPVGTQLV MDHVIIAEDH DLLALICIGL LFFILFRTFL SMLRSWTSLV MGSLVDVQWK AGLFDHLLKL PLAYFEKRKL GDIQSRFGSL DIIRSTLTNN VVNGIIDGLM SIGVFIMMFL YGGWLVWVVL GFTAMYMILR LATYNQYRQA SEEQIVKNAK ASSHFMETLY GISTLKALGL AATRSQFWLN LNIDTTNANI RLTKLDMFFG GVNTLIGTID QVVILWLGAS MVIDGQMTLG MFVAFNAYRG QFSDRATNLI NMVLQLRMLA LHSERIADIV FTETEKEQTP RQLLSPNQPA VFEARNIAFQ YDNLSKPIFS DLNIHVEAGE SVAITGPSGI GKTTLMKVIA GLLTPSQGHI LIDGLDITTV GLNNYRDCIA CVLQDDKLFA GSIADNIASF DVNKDEQRIL SCANHCNIHK EIMHMPMGYE TLISELGGSL SGGQKQRLLI ARALYRQPSL LFLDEATSHL DLANEAHINN AIASLKITRI FIAHRPSTIA SAQRIINLEK QNVS
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