| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0046 |
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| Symbol | ligB |
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| ID | 5798511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 53548 |
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| End bp | 55224 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641338075 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_001604687 |
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| Protein GI | 162420613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTAT TAATATCTAA CACCATAGTG GTGGGCGGTG CTTGGGCTAC ATCAACATGC
CCTGATTGGC CTGCAACCAG AATAGCGGTT GAGATTAACG CGTTGGAGCA ACAGTTGAAT
AAGTGGTCGG CCGCTTACCA TCAGCAAGGC CATAGCCCGG TCACGGATGA CATTTATGAT
CAATTACAGG ACAAATTACG TGTGTGGCAA TCCTGTAGGG GGTTACCTGA TAAGACGGAA
AGCCAGCCGA TCCCCGGCAA AGGGCAATTT CTTCACCCAG TTGCCCATAC CGGGTTAAAA
AAACTCAAAG ATGAAACCGC CCTCACAAGG TGGATGGCGG GGCGGAAAAA TCTCTGGGTA
CAACCCAAGG TCGACGGTGT GGCAGTGACA CTGGTTTATC ACGGGGGGAA ATTGGTGCAA
CTTCTTAGTC GAGGAAATGG AGTAAAAGGT CAAAACTGGA CAGAAAAAGC GCCATTTATT
TCTGCTATTC CTCAATATAT TGCAAATGCG CCTGCACTAT TAACGTTGCA AGGGGAGTTG
TTTCTACTGA TGGATGGCCA CCAGCAAGCA AAATCGGGTG GGGTGAATGC CAGATCAACG
GTGGCAGGTG CACTGATGCG CAAATCTCCG TCTCCGCTAT TAGCTCAAGT TGGGGTCTTT
ATTTGGGCAT GGCCTGATGG CCCAACAACC ATGAAAGAGA AGGTGGCACT ATTACAGGTA
ATGGGTTTTC CTTTTACAGC TAAATACAGC GAGCCCGTCA TGTCGCATCT TGATGTTGTG
CAATGGCGTC AGTTCTGGTT TCAAGCACCA CTGCCGTTTG TCACCGATGG TGTTGTGGTC
AGGCAAGAGG AGGAGCCAGC TGGTCGTTAT TGGCAGGCAA CACCGGGGCA GTGGTCTATG
GCGTGGAAGT ATCCGCCTTT GCAACACATT GCCGAAGTAA AAGATATTCA TTTTACCCTT
GGACGAACGG GTAAAGGCAC GGTGGTATTA GAGGTTTTAC CGATAAAAAT TGATGATAAA
TGGATTCGTC GAGTGAATAT TGGTTCGGTC ACCCGTTGGA AACAATGGGA CATCGCTCCT
GGTGATCACA TTACATTGGC ACTTGCCGGG CATGGTATCC CTCGGCTAGA TAACGTTGTC
TGGCGAGTAC ACCAACGGAA TACTATTACG GCACCCAATT GGGATAAATT CCATCAGCTC
AGTTGCTTTC AACGCTTACC ACATGGCTGT GAACCTCAGT TTTTATCCCG CTTGATATGG
CTTAGTGGCC CAGGGGGGCT AGATATTGGC GGCATCGGTG GCGGCTTTTG GCAAGAGCTT
ATTCACCATG AGTTAATTAA TGATTTGGTC GGATGGTTAT TACTAACACC AGAGCAAATT
GCAAGTATCC CTGGAATTGG AAATGCGCGG GCTGAAAAAA TTTATCAACA GTTTCAACGG
GCAAAGCAGC AACCCTTTTC TCGTTGGTTG CTGGCATTGG GGTTCCCGCA GGTTGTTTCC
GTTGACGCGC AGTGGCAGGT TGTATTGCGC CGGAGTCTAT CTGAATGGGC CACCATGGCC
GGGATTGGGC AAATGAGAGC AAAACAAATT AAGCATTTTT GGGATCACCC CGACGTACAA
GCACTGGCTG ATTTCTTATC TACTCAGAAA GTTGTTGGGT TCGAGCTCAC AGAGTAA
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| Protein sequence | MFLLISNTIV VGGAWATSTC PDWPATRIAV EINALEQQLN KWSAAYHQQG HSPVTDDIYD
QLQDKLRVWQ SCRGLPDKTE SQPIPGKGQF LHPVAHTGLK KLKDETALTR WMAGRKNLWV
QPKVDGVAVT LVYHGGKLVQ LLSRGNGVKG QNWTEKAPFI SAIPQYIANA PALLTLQGEL
FLLMDGHQQA KSGGVNARST VAGALMRKSP SPLLAQVGVF IWAWPDGPTT MKEKVALLQV
MGFPFTAKYS EPVMSHLDVV QWRQFWFQAP LPFVTDGVVV RQEEEPAGRY WQATPGQWSM
AWKYPPLQHI AEVKDIHFTL GRTGKGTVVL EVLPIKIDDK WIRRVNIGSV TRWKQWDIAP
GDHITLALAG HGIPRLDNVV WRVHQRNTIT APNWDKFHQL SCFQRLPHGC EPQFLSRLIW
LSGPGGLDIG GIGGGFWQEL IHHELINDLV GWLLLTPEQI ASIPGIGNAR AEKIYQQFQR
AKQQPFSRWL LALGFPQVVS VDAQWQVVLR RSLSEWATMA GIGQMRAKQI KHFWDHPDVQ
ALADFLSTQK VVGFELTE
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