| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0025 |
|---|
| Symbol | |
|---|
| ID | 5798490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 27583 |
|---|
| End bp | 28149 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641338054 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001604666 |
|---|
| Protein GI | 162420098 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00022411 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC CAAATAAAGC ACCACGCGCG AATATTGCGG CCCCGAAGGG TACAGCAACA
CCAAAACGTA GAAGAAAGAC CCGTGATGAG CTGGATGCTG AAGCACGTGA CCGTAAACGT
CAGAAGAAAC ACAGTGGCAA TCGCTCAGGT GCGAGAACCA ATGTTGAGGG CAGCAATAAG
AAAGGGCATA GCCAGACTCA AGAGAAAGAT CCGCGTGTCG GTAGTAAAGT GCCTGTACCG
CTGGTCATTG AGAGCCAGGT CAAAGCCAAG TCAATGCCTA AGCCTGTAGA GAAAAATGTG
GTTAAGCCAC GCCTGACGCC GGAAGAAGAG CTAGCCAAGC TGGAGAATGA CGAACGTCTG
GATGCGCTGC TTGATCGTCT GGATAATGAC GAAGTATTGA ACAAAGAAGA CCAGGCCTAT
GTCGATCTGA CATTAGACCG TATTGATGCC CTGATGGAGC AATTAGGCAT CGAACTGGGT
GATGACGAAG ATGATGTTGA GCGAGAAGAG AAGCAGGAAG ATATCTTGCA GCTACTGAAA
CGTGGTAATC CAAAAGATAC ATTTTAA
|
|---|
| Protein sequence | MKQPNKAPRA NIAAPKGTAT PKRRRKTRDE LDAEARDRKR QKKHSGNRSG ARTNVEGSNK
KGHSQTQEKD PRVGSKVPVP LVIESQVKAK SMPKPVEKNV VKPRLTPEEE LAKLENDERL
DALLDRLDND EVLNKEDQAY VDLTLDRIDA LMEQLGIELG DDEDDVEREE KQEDILQLLK
RGNPKDTF
|
|---|
| |