Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0009 |
Symbol | |
ID | 5798472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 9496 |
End bp | 10920 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641338036 |
Product | major facilitator transporter |
Protein accession | YP_001604654 |
Protein GI | 162421578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000216435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAT CTGCGCGCAG TATGGCAGGC CTTCCTTGGA TAGCGGCTAT GGCTTTCTTT ATGCAGGCTT TGGATGCCAC CATACTGAAT ACGGCTCTCC CTTCAATCGC CGAAAGCCTT AACCGTTCTC CGCTGACAAT GCAATCAGCC ATTATTAGCT ATACCCTGAC CGTCGCGATG TTGATTCCAG TTAGTGGTTG GCTGGCCGAT CGTTTTGGTA CCCGACGAAT TTTTATCCTG GCGGTTTCTT TATTTACCTT CGGATCACTG CTCTGTGCAC TTTCAGGCTC ACTGGCTTTC TTAGTGGCTT CTCGGGTTAT TCAAGGGATC GGTGGGGCGA TGATGATGCC GGTAGCCAGG CTGGCGCTCA TCCGGGCTTA TCCACGCAGT GAGTTATTGC CGGTTTTAAA TTTTGTCACT ATTCCAGGGT TAGTCGGGCC AGTCATGGGG CCATTATTGG GCGGGTTGTT GGTGACTTAT ACCACTTGGC ATTGGATTTT TATCCTTAAT ATTCCTATTG GCTTGTTGGG TATTTTTTAT GCCCGCAAAT ATATGCCTAA TTTCACGATG CCTAAGCGCA CTTTTGATTT TGTTGGTTTC CTACTATTTG GTATCAGTTT AGTCATGATA TCCACCAGCC TGGAGATTAT GGGGCGGCCA GAAATCGCAG ATTATTTACC CGCCGCAACT CTGCTAGGCG GCCTATTAAT GCTGATTTTC TATATATTTC ATGCCAAAGG CCATCCTAAT CCACTCATTG GTTTGCCATT ATTTAAGACC CGGACATTCT CCGTGGGGAT TGCCGGTAAC GTGGCCTCCC GCTTAGGGAC GGGCTGTGTA CCTTTTTTAA TGCCGTTGAT GTTACAAGTT GGATTCGGTT ATTCCGCACT TATCGCCGGT TGTATGATGG CTCCCACCGC GATTGGATCC ATCATGGCAA AATCAGCCGT CACACAGGTG CTGCGCTCAC TGGGCTATCG TAAAGTGTTA GTCGGTATAA CCTTAATTAT CGGGGTACTG ATTGCCTCCT TTGCATTGCA ATCACCGGGG ATGTCGGCAT GGATGATGAT ATTGCCGCTA TTTATATTAG GTATAGCGAT GTCGACCCAA TTTACTGCGA TGAATACAAT TACACTGGCT GATTTGACGG ATAACAATGC CAGCTCCGGT AACAGTGTTC TGGCGGTAAC CCAACAATTA TCGATAAGCT TTGGGATTGC TATCAGTGCG ACTGTGTTGC GTTTTTATGA TGGGTTGTCG TTAGGCGGTA ATGTGGATCA CTTCCACTAC ACCTTTATCA CCATGGGAAT AGTGACATTG CTATCATCTC TGGTGTTCTT GTTACTCAAA CCCAGGGATG GAGACAATTT AATTCAGGGC CGTAATGTGA AAAAAGTAGC CCCACAGGTG AAAAATAATG TTTAA
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Protein sequence | MIKSARSMAG LPWIAAMAFF MQALDATILN TALPSIAESL NRSPLTMQSA IISYTLTVAM LIPVSGWLAD RFGTRRIFIL AVSLFTFGSL LCALSGSLAF LVASRVIQGI GGAMMMPVAR LALIRAYPRS ELLPVLNFVT IPGLVGPVMG PLLGGLLVTY TTWHWIFILN IPIGLLGIFY ARKYMPNFTM PKRTFDFVGF LLFGISLVMI STSLEIMGRP EIADYLPAAT LLGGLLMLIF YIFHAKGHPN PLIGLPLFKT RTFSVGIAGN VASRLGTGCV PFLMPLMLQV GFGYSALIAG CMMAPTAIGS IMAKSAVTQV LRSLGYRKVL VGITLIIGVL IASFALQSPG MSAWMMILPL FILGIAMSTQ FTAMNTITLA DLTDNNASSG NSVLAVTQQL SISFGIAISA TVLRFYDGLS LGGNVDHFHY TFITMGIVTL LSSLVFLLLK PRDGDNLIQG RNVKKVAPQV KNNV
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