Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_0080 |
Symbol | |
ID | 5798362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010158 |
Strand | + |
Start bp | 55651 |
End bp | 56313 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641337975 |
Product | Ig-like domain-containing protein |
Protein accession | YP_001604592 |
Protein GI | 162417850 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 547 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 539 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAC AAAAGATGAA GATCACGGAA GAGGCGTTTT CGGATTTCAC GGGGCATATG TGCCGTGCCG GATTCACCAA TTCCATCTCC AACGAGCCTC TGAGCGAGCG CCAGCAGAAT CATCTTGCGG CTTGCTTCCG GGCAATTCCG TTCACTCAGT CTGTCACCAT TACACCGACT GCGCCGTCCG TATTGGTGGG CAAAACCGTT CAACTTAGTG CAGGTATCAC CATGAGCAAA AGTGCAGATT CATTCACCTG GACGTCAGAC AATGACCGGG TCGCCACAGT CAGCGGTACG GGTCTGGTTA CTGGCGTGAC TCCGGGCAAA GTGAAGATCA CCGCCACCGA TAAGCAGACT CAGCTTTCTG CCTCAGTCGA AGTGATCGTT AAGCCTGTCA GCGTGGAGTC CGTAACCGTA ACGCCTGACT CTACCTCCGT TGAGAAGGGG AAATCGGTCA AGTTGCGTGT TGATGTACAA CCGTCAAATG CAACCAATAA AAAAGTCACC TGGACTTCCA AAAATAGCGA CAAAGCGACT GTTGACCAGA ACGGTAACGT AGCTGGCGTA GCCGTTGGTA CGGCAACTAT TGAAGTGGTT TCGCAGGATG GCAGCCACAA AGCTACTGCG ACTGTGGAAG TGACTGCAGC ACCGGCTGCG TAA
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Protein sequence | MPEQKMKITE EAFSDFTGHM CRAGFTNSIS NEPLSERQQN HLAACFRAIP FTQSVTITPT APSVLVGKTV QLSAGITMSK SADSFTWTSD NDRVATVSGT GLVTGVTPGK VKITATDKQT QLSASVEVIV KPVSVESVTV TPDSTSVEKG KSVKLRVDVQ PSNATNKKVT WTSKNSDKAT VDQNGNVAGV AVGTATIEVV SQDGSHKATA TVEVTAAPAA
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