| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0070 |
|---|
| Symbol | yopJ |
|---|
| ID | 5798256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | - |
|---|
| Start bp | 47850 |
|---|
| End bp | 48716 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641337880 |
|---|
| Product | effector protein YopJ |
|---|
| Protein accession | YP_001604500 |
|---|
| Protein GI | 162417798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.218206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAC CAATATCACA AATAAATATC TCCGGTGGCT TATCAGAAAA AGAGACCAGT
TCTTTAATCA GTAATGAAGA GCTTAAAAAT ATCATAACAC AGTTGGAAAC TGATATATCG
GATGGATCCT GGTTCCATAA AAATTATTCA CGTATGGATG TAGAAGTCAT GCCCGCATTG
GTAATCCAGG CGAACAATAA ATATCCGGAA ATGAATCTTA ATCTTGTTAC ATCTCCATTG
GACCTTTCAA TAGAAATAAA AAACGTCATA GAAAATGGAG TTAGATCTTC CCGCTTCATA
ATTAACATGG GGGAAGGTGG AATACATTTC AGTGTAATTG ATTACAAACA TATAAATGGG
AAAACATCTC TGATATTGTT TGAACCAGCA AACTTTAACA GTATGGGGCC AGCGATGCTG
GCAATAAGGA CAAAAACGGC TATTGAACGT TATCAATTAC CTGATTGCCA TTTCTCCATG
GTGGAAATGG ATATTCAGCG AAGCTCATCT GAATGTGGTA TTTTTAGTTT TGCACTGGCA
AAAAAACTTT ACATCGAGAG AGATAGCCTG TTGAAAATAC ATGAAGATAA TATAAAAGGT
ATATTAAGTG ATGGTAAAAA TCCTTTACCC CACGATAAGT TGGACCCGTA TCTCCCGGTA
ACTTTTTACA AACATACTCA AGGTAAAAAA CGTCTTAATG AATATTTAAA TACTAACCCG
CAGGGAGTTG GTACTGTTGT TAACAAAAAA AATGAAACCA TCGTTAATAG ATTTGATAAC
AATAAATCCA TTGTAGATGG AAAGGAATTA TCAGTTTCGG TACATAAAAA GAGAATAGCT
GAATATAAAA CACTTCTCAA AGTATAA
|
|---|
| Protein sequence | MIGPISQINI SGGLSEKETS SLISNEELKN IITQLETDIS DGSWFHKNYS RMDVEVMPAL
VIQANNKYPE MNLNLVTSPL DLSIEIKNVI ENGVRSSRFI INMGEGGIHF SVIDYKHING
KTSLILFEPA NFNSMGPAML AIRTKTAIER YQLPDCHFSM VEMDIQRSSS ECGIFSFALA
KKLYIERDSL LKIHEDNIKG ILSDGKNPLP HDKLDPYLPV TFYKHTQGKK RLNEYLNTNP
QGVGTVVNKK NETIVNRFDN NKSIVDGKEL SVSVHKKRIA EYKTLLKV
|
|---|
| |