| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0064 |
|---|
| Symbol | yscM |
|---|
| ID | 5798293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | + |
|---|
| Start bp | 42325 |
|---|
| End bp | 42672 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641337875 |
|---|
| Product | type III secretion apparatus protein YscM |
|---|
| Protein accession | YP_001604495 |
|---|
| Protein GI | 162417801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 97 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA ATACTCTTCA ATCGTTAATA AATCAACAAA TTACCCAAGT GGGACACGGG
GGGCAGGCCG GTCGTCTCAC TGAAACTAAC CCACTCACAG AGAATAGTCA TCAGATATCT
ACCGCCGAAA AAGCCTTTGC CAATGAGGTG CTGGAACATG TGAAAAATAC GGCTCTCAGT
CGTCACGATA TTGCCTGCTT ATTACCACGC GTTTCTAATT TGGAACTAAA GCAGGGCAAG
GCAGGGGAAG TGATAGTGAC CGGCTTGCGT ACTGAACAAC TCTCGCTTAG CGATGCTAAA
TTATTGCTAG AAGCCGCCAT GCGCCAGGAT ACGGCGGCTG ACGGCTGA
|
|---|
| Protein sequence | MKINTLQSLI NQQITQVGHG GQAGRLTETN PLTENSHQIS TAEKAFANEV LEHVKNTALS
RHDIACLLPR VSNLELKQGK AGEVIVTGLR TEQLSLSDAK LLLEAAMRQD TAADG
|
|---|
| |