| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0061 |
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| Symbol | yscJ |
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| ID | 5798279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 40126 |
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| End bp | 40860 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641337872 |
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| Product | type III secretion apparatus lipoprotein YscJ |
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| Protein accession | YP_001604492 |
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| Protein GI | 162417757 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 74 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAGTTA AGACTTCACT GTCAACATTG ATATTAATCT TGTTTTTAAC TGGTTGCAAA
GTTGATCTTT ATACCGGAAT TAGTCAGAAG GAAGGGAACG AAATGCTTGC GCTGTTGCGC
CAAGAAGGCC TTTCCGCAGA CAAAGAGCCA GACAAAGATG GGAAGATTAA GCTCTTGGTT
GAGGAGTCAG ATGTCGCTCA GGCTATTGAT ATTCTCAAAC GGAAGGGCTA TCCACACGAG
AGTTTCTCCA CGTTACAGGA TGTGTTCCCC AAAGATGGGT TGATATCTTC ACCGATAGAA
GAGTTGGCGA GGCTTAATTA TGCCAAGGCG CAAGAGATCT CCCGCACTTT ATCTGAAATT
GACGGGGTAT TAGTGGCTCG AGTGCATGTC GTATTGCCTG AAGAGCAAAA TAACAAAGGT
AAGAAGGGTG TAGCAGCATC CGCTTCGGTT TTTATCAAGC ATGCAGCAGA TATTCAGTTT
GATACCTACA TACCTCAGAT TAAACAATTA GTGAATAATA GTATTGAGGG GCTGGCCTAT
GATCGCATCA GTGTCATTTT GGTGCCATCG GTAGATGTTC GTCAAAGCTC TCATTTACCT
CGTAACACGA GCATACTGTC AATTCAAGTG AGTGAAGAGT CAAAAGGGCA TCTTATTGGC
TTGTTGTCGT TGCTTATTTT GCTTTTGCCA GTGACCAATC TTGCTCAATA TTTTTGGTTA
CAACGCAAGA AGTGA
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| Protein sequence | MKVKTSLSTL ILILFLTGCK VDLYTGISQK EGNEMLALLR QEGLSADKEP DKDGKIKLLV
EESDVAQAID ILKRKGYPHE SFSTLQDVFP KDGLISSPIE ELARLNYAKA QEISRTLSEI
DGVLVARVHV VLPEEQNNKG KKGVAASASV FIKHAADIQF DTYIPQIKQL VNNSIEGLAY
DRISVILVPS VDVRQSSHLP RNTSILSIQV SEESKGHLIG LLSLLILLLP VTNLAQYFWL
QRKK
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