| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0060 |
|---|
| Symbol | yscI |
|---|
| ID | 5798262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | + |
|---|
| Start bp | 39772 |
|---|
| End bp | 40119 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641337871 |
|---|
| Product | type III secretion apparatus protein YscI |
|---|
| Protein accession | YP_001604491 |
|---|
| Protein GI | 162417738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02497] type III secretion apparatus protein, YscI/HrpB, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 92 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACA TAGAAATAGC TCAGGCCGAT GAGGTGATCA TAACCACGCT GGAGGAATTA
GGGCCGGCAG AGCCAACAAC TGACCAAATA ATGCGCTTTG ATGCGGCAAT GTCAGAAGAT
ACGCAGGGAC TGGGCCATTC ACTCCTCAAG GAGGTTAGTG ATATTCAGAA GTCTTTTAAG
ACGGTTAAAA GTGACTTACA CACTAAGCTG GCTGTTTCAG TTGATAATCC CAACGACCTG
ATGCTAATGC AATGGTCACT TATCCGTATA ACAATCCAAG AAGAACTTAT CGCCAAGACT
GCCGGGCGAA TGAGCCAAAA TGTTGAAACC TTGTCGAAGG GGGGGTGA
|
|---|
| Protein sequence | MPNIEIAQAD EVIITTLEEL GPAEPTTDQI MRFDAAMSED TQGLGHSLLK EVSDIQKSFK
TVKSDLHTKL AVSVDNPNDL MLMQWSLIRI TIQEELIAKT AGRMSQNVET LSKGG
|
|---|
| |